Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015415.1_202016-12-
23] 147 sequences; 25,410,563 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq63 168 2e-36
seq55 163 7e-35
seq101 159 8e-34
>seq63
Length=908128
Score = 168 bits (186), Expect = 2e-36
Identities = 161/205 (79%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || ||||| || || || ||||||||||||||||| || || |||
Sbjct 127553 CAAATCTTCGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGAC 127612
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||| ||||| ||||| || |||||||||
Sbjct 127613 ACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCGCCAGACCAGCAA 127672
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| ||||| | ||||| || || || ||| ||
Sbjct 127673 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCGGACTACAACATC 127732
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 127733 CAAAAGGAGTCGACCCTCCA-CTTG 127756
>seq55
Length=1512399
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || || || |||||||||||||| || ||| |||
Sbjct 1270625 CAAATCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGAC 1270566
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||| |||||||| || || |||||||||
Sbjct 1270565 ACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAGCAA 1270506
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| ||||| | ||||| || || || ||| ||
Sbjct 1270505 CGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTCGCGGACTACAACATC 1270446
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || || || || ||||
Sbjct 1270445 CAAAAGGAGTCGACCCTCCA-CTTG 1270422
>seq101
Length=1647458
Score = 159 bits (176), Expect = 8e-34
Identities = 159/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct 463720 CAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCGGAC 463779
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || ||||| || ||||||||
Sbjct 463780 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 463839
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| |||||| ||
Sbjct 463840 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTATAACATC 463899
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 463900 CAGAAGGAGTCGACGCTCCA-CTTG 463923
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || ||||||||||| |||||||| || || |||
Sbjct 462808 CAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCGGAC 462867
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || ||||| || ||||||||
Sbjct 462868 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 462927
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 462928 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAACATC 462987
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 462988 CAGAAGGAGTCGACGTTGCA-CTTG 463011
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || ||||||||||| |||||||| || || |||
Sbjct 463492 CAAATCTTTGTCAAGACCCTGACCGGTAAAACGATCACGCTCGAGGTCGAGTCGTCGGAC 463551
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || ||||| || ||||||||
Sbjct 463552 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 463611
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 463612 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAACATC 463671
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 463672 CAGAAGGAGTCGACGTTGCA-CTTG 463695
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct 689802 CAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCGGAC 689861
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| || || || ||||| ||||||||
Sbjct 689862 ACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAGCAG 689921
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 689922 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAACATC 689981
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 689982 CAGAAGGAGTCGACGTTGCA-CTTG 690005
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || ||||||||||| |||||||| || || |||
Sbjct 690030 CAAATCTTTGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTCGAGTCGTCGGAC 690089
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| |||||||||||||| || || |||||||| ||||||||
Sbjct 690090 ACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCAGACCAGCAG 690149
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || || ||
Sbjct 690150 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAATATC 690209
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 690210 CAGAAGGAGTCGACGTTGCA-CTTG 690233
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct 462580 CAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCGGAC 462639
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || ||||| || ||||||||
Sbjct 462640 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 462699
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 462700 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAACATC 462759
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 462760 CAGAAGGAGTCGACGTTGCA-CTTG 462783
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct 463036 CAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCGGAC 463095
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || ||||| || ||||||||
Sbjct 463096 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 463155
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 463156 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAACATC 463215
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 463216 CAGAAGGAGTCGACGTTGCA-CTTG 463239
Score = 145 bits (160), Expect = 2e-29
Identities = 156/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || || || || ||||||||||| |||||||| || || |||
Sbjct 463264 CAAATCTTCGTCAAGACCCTGACCGGCAAAACGATCACGCTCGAGGTTGAGTCGTCGGAC 463323
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || ||||| || ||||||||
Sbjct 463324 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGCAG 463383
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| || || |||||||| ||||| | || || ||||| || ||| ||
Sbjct 463384 CGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCCGACTACAACATC 463443
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 463444 CAGAAGGAGTCGACGTTGCA-CTTG 463467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203728932847518
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |