Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq98 95.1 3e-14 >seq98 Length=574835 Score = 95.1 bits (104), Expect = 3e-14 Identities = 292/442 (66%), Gaps = 16/442 (4%) Strand=Plus/Minus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | || ||||| Sbjct 431270 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGCGTACCAAAT 431211 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | || ||| | ||| ||| ||||||| | | || |||||| Sbjct 431210 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 431153 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || || || || || | | |||||||| || || || ||| || ||||| | Sbjct 431152 CGATAATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCAGCAACGT 431093 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | || ||||| ||||| ||||| |||| Sbjct 431092 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 431036 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033 | || || || |||||| ||||| || ||||||| ||||| ||||| ||| | Sbjct 431035 ACAAGACCTTGCGTTGACCTGGCTTAAACCCATCAATTACAGAGGGAATAGAGCGCACGT 430976 Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092 ||| | |||||| | || | ||||||| ||||| | | || |||| || ||| Sbjct 430975 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCG 430917 Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150 | | ||||||| || | | || || || | ||| || | ||| |||||||| | Sbjct 430916 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 430859 Query 282151 CCTCGGCCCGAGTCTTGTTGAA 282172 |||||| |||||||||| Sbjct 430858 TGTCGGCCTTCTTCTTGTTGAA 430837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821750140580