Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq68 102 6e-17
>seq68
Length=952209
Score = 102 bits (112), Expect = 6e-17
Identities = 226/337 (67%), Gaps = 4/337 (1%)
Strand=Plus/Plus
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
|||||||||| || | ||||| ||||| || || || || ||| | | | | |
Sbjct 226580 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 226639
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046
|| | || || || ||||| || || | |||||| | | |||| |||||
Sbjct 226640 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCATCCTTGGCTGTCCTATACTCTGCG 226699
Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106
|| ||||||||||| || || ||||| || ||||| | ||| || || || || | |
Sbjct 226700 CCAAAATGCCTCCATTGGAACCCATAAACTGGTCCCAAATCCCCCTCTTCCCTATGACCC 226759
Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166
|| |||| ||| || ||||| ||| ||||||||| |||||||||| | || || ||
Sbjct 226760 AACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCC--CT 226817
Query 102167 GCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224
|| || | ||| || || ||||||| | ||||| | ||||| || | |
Sbjct 226818 TCTCGGACAATGATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGATGA 226877
Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261
||||| | ||| ||| |||| ||||| ||||| ||
Sbjct 226878 TACCTCGCGTAAAGACTTTCTTGGTAGTCAAAAGGGG 226914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250469143666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |