Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq68 102 6e-17 >seq68 Length=952209 Score = 102 bits (112), Expect = 6e-17 Identities = 226/337 (67%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||| ||||| || || || || ||| | | | | | Sbjct 226580 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 226639 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 || | || || || ||||| || || | |||||| | | |||| ||||| Sbjct 226640 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCATCCTTGGCTGTCCTATACTCTGCG 226699 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 || ||||||||||| || || ||||| || ||||| | ||| || || || || | | Sbjct 226700 CCAAAATGCCTCCATTGGAACCCATAAACTGGTCCCAAATCCCCCTCTTCCCTATGACCC 226759 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166 || |||| ||| || ||||| ||| ||||||||| |||||||||| | || || || Sbjct 226760 AACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCC--CT 226817 Query 102167 GCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 || || | ||| || || ||||||| | ||||| | ||||| || | | Sbjct 226818 TCTCGGACAATGATTTAGAATCGGTCGATCCTCGAACGAACCAAAGTAGTTCCTCGATGA 226877 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 ||||| | ||| ||| |||| ||||| ||||| || Sbjct 226878 TACCTCGCGTAAAGACTTTCTTGGTAGTCAAAAGGGG 226914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250469143666