Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq68 102 6e-17 >seq68 Length=952209 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||||| || | || || |||||||| || || | || | || | | | Sbjct 226580 TTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGATTCTCCTTGATACTCTTGACAACC 226639 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAA--GACCTTGATATTCTG 97408 ||| | || ||||| || || || || ||||| | ||| | ||| ||| |||| Sbjct 226640 TGCATCAACTGATCGACTCCCTCCCCCTGATAATCATCCTTGGCTGTCCT--ATACTCTG 226697 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | |||||||||||||||||||| |||||||| ||||| | || || ||||| |||| || Sbjct 226698 CGCCAAAATGCCTCCATTGGAACCCATAAACTGGTCCCAAATCCCCCTCTTCCCTATGAC 226757 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 || |||| || || ||| | || |||||||| |||||||||| Sbjct 226758 CCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCCAAAT 226806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783298412620