Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq114 105 4e-18 seq67 105 4e-18 seq70 96.9 2e-15 >seq114 Length=793728 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | || || ||||| |||||||| |||| ||| ||| | || Sbjct 567710 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 567651 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || | ||||||||||| ||| | || ||||||||| Sbjct 567650 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 567591 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | |||| || | || ||||| || | |||||| || Sbjct 567590 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 567531 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||||||| || || || || ||||| |||||| Sbjct 567530 TTGCCGGTCAGGGTCTTGACGAAGATTTGCATC 567498 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | || || ||||| || |||||||||| ||| ||| | || Sbjct 567938 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCC 567879 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| || || || | ||||| ||||| ||| | | ||||||||| Sbjct 567878 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGAATACCCTCCTTGTCC 567819 Query 34298 GCTATCTTTTGCTTTAGA--TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 ||||| | ||| || | | | |||| || | || ||||| || | |||||| | Sbjct 567818 TGGATCTT--GGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCG 567761 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||||||| || || || || ||||||||||| Sbjct 567760 TCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567727 >seq67 Length=473732 Score = 105 bits (116), Expect = 4e-18 Identities = 141/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 || || || ||||||||||||| | || || ||| | || || | ||||||||| ||||| Sbjct 308874 TCCTTTTGGATGTTGTAGTCGGCCAAGGTG-CGGCCATCCTCGAGCTGCTTGCCGGCGAA 308932 Query 34258 AATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 ||||| || |||||||| | |||| | || |||||||| ||||| ||| | | Sbjct 308933 GATGAGACGTTGCTGGTCTGGCGGG-ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGT 308991 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | |||| |||| ||| ||||| || | ||||| || ||||| || ||||| || | Sbjct 308992 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 309051 Query 34377 CAAAGATCTGC 34387 ||||||| ||| Sbjct 309052 CAAAGATTTGC 309062 >seq70 Length=566626 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||| ||| | || || ||||| ||||||||||||| Sbjct 52130 CCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 52071 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| || || || | ||||| ||||| ||| Sbjct 52070 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 52011 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA--TCGGCTATCGAATCGGTCGATTCGA 34340 | | ||||||||| || | ||| ||| || | | | |||| || | || |||| Sbjct 52010 ATACCCTCCTTGTC--CTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGA 51953 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | |||||| || |||||||| || || || || ||||| ||||| Sbjct 51952 CCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071346384960