Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq75 104 2e-18 seq131 93.3 4e-15 seq49 84.2 2e-12 >seq75 Length=349689 Score = 104 bits (114), Expect = 2e-18 Identities = 125/169 (74%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 14517 ATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACT 14576 || |||| ||| |||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct 348544 ATCATGGAAAAAGGAACAGTAAAATGGTTTAACGCAGACAAAGGTTTTGGTTTTATCGAG 348603 Query 14577 TCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAA 14636 |||| || | || | |||| ||||||| || ||| || || |||||| Sbjct 348604 GTTGAAGGCGGAGACGACGTATTCGTTCACTTCAGCGCTATCGTTGGCGACGGCTTCAAA 348663 Query 14637 TCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAAC 14685 || || || ||||||||| ||||||||| |||| | | |||| |||| Sbjct 348664 TCGCTGGACGAAGGTCAACGCGTTGAATTTAATGTAGTACAAGG-CAAC 348711 >seq131 Length=37478 Score = 93.3 bits (102), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Minus Query 14534 AGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATC---ACTTCAGAAGAAGGCAA 14590 ||| ||||||||||| ||||| || || | |||||| ||| ||||| |||| || Sbjct 18312 AGTTAAATGGTTTAATGCAGAGAAGGGTTATGGCTTCATCGAAACTTCCGAAGGTGG--- 18256 Query 14591 AGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAGG 14650 ||| | |||| ||||||||| || |||||||| || || |||||| | || || ||||| Sbjct 18255 AGACGTATTCGTTCACTTCTCCGCTATCCAATCAGAAGGCTTCAAAACGCTCGAAGAAGG 18196 Query 14651 TCAAAAAGTTGAATTTGA 14668 ||| | || ||||| || Sbjct 18195 ACAAGATGTAGAATTCGA 18178 >seq49 Length=106853 Score = 84.2 bits (92), Expect = 2e-12 Identities = 132/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 14520 ATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATC--ACTT 14577 |||| || ||||||||| |||||||||||||| || ||||| ||||| |||||| | || Sbjct 23095 ATGGAAACTGGAACAGTTAAATGGTTTAACGCTGAGAAAGGCTTTGGTTTTATCGAAGTT 23154 Query 14578 CAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAAT 14637 |||| || | || | |||| |||||| || ||| || || |||||| Sbjct 23155 --GAAGGCGGAAGCGACGTATTCGTACACTTCAGCGCTATCACTGGCGACGGCTTCAAAA 23212 Query 14638 CACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTCAAG 14697 | ||||| ||||||||| ||| |||| ||| | | |||| | || |||| |||| Sbjct 23213 CGCTTGACGAAGGTCAACGCGTTCAATTCGATATCGTTCAAGGCAACCGCGGTCCACAAG 23272 Query 14698 CAGTCAA 14704 | | ||| Sbjct 23273 CCGACAA 23279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48454306997836