Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq79 150 4e-31
>seq79
Length=767515
Score = 150 bits (166), Expect = 4e-31
Identities = 463/709 (65%), Gaps = 13/709 (2%)
Strand=Plus/Plus
Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817
||||| || |||||| ||| ||| || |||| || ||||| | ||||| |
Sbjct 3284 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 3343
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||||||||| ||| || || | || ||||| ||||||
Sbjct 3344 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATTGACGGCAAG 3403
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||| ||||| ||||||||| | ||||| || || ||||| |||||| | | |||
Sbjct 3404 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGAC 3463
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997
|| ||| |||| | || |||||| | ||| || || | | || || ||| |
Sbjct 3464 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGGTACTTTACCCACGCCTCG 3523
Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTT-CTTG 249055
|||||||||||||||||||| || | || || ||||| ||||| |||||| |
Sbjct 3524 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCGTG-TTTCTTGGTCA 3581
Query 249056 CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGA 249112
| ||| | || || || |||| ||||| || |||||||| | ||||| || |
Sbjct 3582 CGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCA---AGACGTGCGCTCTCA 3638
Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172
| || || ||| || || |||||| | | || ||||||||| |||| || || |
Sbjct 3639 TCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCT 3698
Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232
|||| || || || || | | || ||||| ||| | || || || |
Sbjct 3699 ACATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATA 3758
Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATT 249289
|||||| | | | || |||| | || | || || | ||||| || ||
Sbjct 3759 ACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACC 3818
Query 249290 TGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACG 249349
| || ||||||||| || | || |||||||||||| | |||||| ||||||| |
Sbjct 3819 TCGAGCCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGG 3878
Query 249350 AGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCC 249409
|| | | || ||||| ||||| | | || ||| | |||| | |||||| |
Sbjct 3879 AGGAAGTCCGCGCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGC 3938
Query 249410 GCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCC 249458
| ||| |||||| |||||| ||| | || | | || |||| |||||
Sbjct 3939 GTGTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCC 3987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764116233088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |