Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq79 150 4e-31 >seq79 Length=767515 Score = 150 bits (166), Expect = 4e-31 Identities = 463/709 (65%), Gaps = 13/709 (2%) Strand=Plus/Plus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| || ||||| | ||||| | Sbjct 3284 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTTATCTACGACCGCGATTTCGGC 3343 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||||||||| ||| || || | || ||||| |||||| Sbjct 3344 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATTGACGGCAAG 3403 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| ||||||||| | ||||| || || ||||| |||||| | | ||| Sbjct 3404 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGAC 3463 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || || | | || || ||| | Sbjct 3464 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGAGCGGTACTTTACCCACGCCTCG 3523 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTT-CTTG 249055 |||||||||||||||||||| || | || || ||||| ||||| |||||| | Sbjct 3524 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCGTG-TTTCTTGGTCA 3581 Query 249056 CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGA 249112 | ||| | || || || |||| ||||| || |||||||| | ||||| || | Sbjct 3582 CGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCA---AGACGTGCGCTCTCA 3638 Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172 | || || ||| || || |||||| | | || ||||||||| |||| || || | Sbjct 3639 TCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCT 3698 Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232 |||| || || || || | | || ||||| ||| | || || || | Sbjct 3699 ACATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATA 3758 Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATT 249289 |||||| | | | || |||| | || | || || | ||||| || || Sbjct 3759 ACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACC 3818 Query 249290 TGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACG 249349 | || ||||||||| || | || |||||||||||| | |||||| ||||||| | Sbjct 3819 TCGAGCCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGG 3878 Query 249350 AGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCC 249409 || | | || ||||| ||||| | | || ||| | |||| | |||||| | Sbjct 3879 AGGAAGTCCGCGCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGC 3938 Query 249410 GCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCC 249458 | ||| |||||| |||||| ||| | || | | || |||| ||||| Sbjct 3939 GTGTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCC 3987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764116233088