Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq79 127 3e-24 >seq79 Length=767515 Score = 127 bits (140), Expect = 3e-24 Identities = 417/643 (65%), Gaps = 4/643 (1%) Strand=Plus/Minus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| || ||| | ||| || || | ||| |||||||| |||||||| || || | ||| Sbjct 3961 CCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAA 3902 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | | |||||| || || ||||| ||| || |||||| | | Sbjct 3901 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 3842 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | |||| |||||||| || | ||| || || | |||| || || ||||| || || Sbjct 3841 GACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 3782 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 || || | ||| | ||||||||||| || || | | ||| || | || ||||| || Sbjct 3781 TTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 3722 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 || || || |||| || ||| || | || || || || || | ||| Sbjct 3721 GTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 3662 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCATAGATGCCTT 63606 || || || || | || ||||| | ||||| ||| || | |||||| |||||||||| Sbjct 3661 GATACCACCGGCGGTCTTGGAGATGAGAGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 3603 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666 | || |||||| |||| | | | ||||| || | || | ||| |||| Sbjct 3602 CGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTC 3543 Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726 | || || || | || || || ||||| ||||| | || || | || ||||||| Sbjct 3542 CGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACG 3483 Query 63727 TCT-CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785 || ||| | | || || || ||||| || || ||||||||||| | |||| Sbjct 3482 ACTGCAAGA-CGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATG 3424 Query 63786 TGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63845 ||||| || | ||| | | ||| || || | ||||||||| || | ||| Sbjct 3423 TGCTGCGGGCGTTCGGCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTT 3364 Query 63846 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63888 || || ||||| |||||||| || || || ||||| |||| Sbjct 3363 TTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 3321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816293128480