Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_003345.1
Length=77670
Score E
Sequences producing significant alignments: (Bits) Value
seq110 87.8 9e-13
seq85 87.8 9e-13
seq75 87.8 9e-13
seq56 87.8 9e-13
>seq110
Length=50150
Score = 87.8 bits (96), Expect = 9e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct 18805 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGTCCTTC 18862
>seq85
Length=75362
Score = 87.8 bits (96), Expect = 9e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct 1900 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGTCCTTC 1843
>seq75
Length=349689
Score = 87.8 bits (96), Expect = 9e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct 253673 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGTCCTTC 253730
>seq56
Length=175490
Score = 87.8 bits (96), Expect = 9e-13
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||
Sbjct 121094 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGTCCTTC 121151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 248418697416906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |