Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq70 111 2e-19
seq114 105 7e-18
seq101 96.9 3e-15
seq67 93.3 4e-14
>seq70
Length=566626
Score = 111 bits (122), Expect = 2e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || ||||| | ||| ||||| || || ||||| ||||||
Sbjct 51902 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 51843
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || |||||||| || || ||| |||| |||||||| || || || ||
Sbjct 51842 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 51783
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | ||||| | || ||| |||
Sbjct 51782 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 51723
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| | || | |||||||||||||| || || ||||| ||||||||| ||
Sbjct 51722 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCATACCT 51672
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || ||||| | ||| ||||| || || ||||| ||||||
Sbjct 51446 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 51387
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || |||||||| || ||||| |||| |||||||| || || || ||
Sbjct 51386 AGCGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 51327
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || ||| | | || | ||||| | || ||| |||
Sbjct 51326 ATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 51267
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | |||||||||||||| || || ||||| ||||||||
Sbjct 51266 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51220
Score = 102 bits (112), Expect = 8e-17
Identities = 163/234 (70%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || || || | ||||| || ||||| | ||| ||||| || || ||||| || |||
Sbjct 52133 TGACCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 52074
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| |||| || |||||||| || |||||| |||||| || || || || ||
Sbjct 52073 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGG 52014
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714
|| || || || ||||| ||| || ||| | | || | ||||| | || |||
Sbjct 52013 GGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCG 51954
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
||||| | || | |||||||||||||| || || ||||| ||||||||| ||
Sbjct 51953 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCATACCT 51900
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || ||||| | ||| ||||| || || || || || |||
Sbjct 51674 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 51615
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || |||||||| || |||||| |||||| || || || || || ||
Sbjct 51614 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 51555
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || ||| | | || | ||||| | || ||| |||
Sbjct 51554 ATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 51495
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| | || | |||||||||||||| || || ||||| ||||||||| ||
Sbjct 51494 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCATACCT 51444
>seq114
Length=793728
Score = 105 bits (116), Expect = 7e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| |||||||| | ||| | || ||||| | ||| ||||| || || || || ||||||
Sbjct 568184 TGTCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCG 568125
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| |||| || || ||||| || ||||| |||| |||||||| || || ||
Sbjct 568124 GCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGG 568065
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTC 139713
|| ||||| || ||||| ||| | || | || | | || | ||||| | || |||
Sbjct 568064 GGAATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTC 568006
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
||||| | || | |||||||||||||| || || ||||| ||||||||| ||
Sbjct 568005 GACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCATACCT 567951
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || ||||| | ||| ||||| || || ||||| ||||||
Sbjct 567725 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 567666
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || |||||||| || || || |||||| || ||||| || || ||
Sbjct 567665 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 567606
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| | || | || | | || | ||||| | || ||| ||
Sbjct 567605 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 567547
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | || | |||||||||||||| || || ||||| ||||||||
Sbjct 567546 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567499
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || ||||| | ||| ||||| || || || || || |||
Sbjct 567953 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 567894
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || |||||||| || |||||| |||||| || || || || || ||
Sbjct 567893 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 567834
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| ||| || ||| | | || | ||||| | || ||| |||
Sbjct 567833 ATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 567774
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | |||||||||||||| || || ||||| || ||||||
Sbjct 567773 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATA 567726
>seq101
Length=1000389
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||| | || ||||| ||||||||||| |||||| | |||| || |||
Sbjct 688373 ACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCCTCG 688432
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
||||| || || || |||| ||||||||||| || || || |||||||| ||||| |
Sbjct 688433 AGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 688492
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| || || | | || | ||||||| | ||| ||||| | ||| | ||||||
Sbjct 688493 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 688552
Query 139736 CCGGTCAACGTTTTTACGAATATTTGCA 139763
|| || | || || || || |||||||
Sbjct 688553 CCCGTGAGGGTCTTGACAAAGATTTGCA 688580
>seq67
Length=473732
Score = 93.3 bits (102), Expect = 4e-14
Identities = 156/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| ||||| | || | || || || | || ||||| ||||| ||||| || |||
Sbjct 308837 GCCACCTCGGAGGCGGAGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 308896
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| || |||||||| || || || |||| ||||||||||| || || ||
Sbjct 308897 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGG 308956
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||| ||||| ||| || || | | || | ||||||| | ||| ||
Sbjct 308957 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 309016
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGC 139762
||| | ||| | ||||||||| || | || || || || ||||||
Sbjct 309017 CTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 309062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496062970667200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |