Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq79 113 6e-20 >seq79 Length=767515 Score = 113 bits (124), Expect = 6e-20 Identities = 405/627 (65%), Gaps = 10/627 (2%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || | ||| |||||||| |||||||| || || | ||| ||||| | | | Sbjct 3942 ACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACT 3883 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || ||||| ||| || |||||| | | | |||| |||||||| Sbjct 3882 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGC 3823 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||| || || | |||| || || ||||| || || || || | ||| | ||| Sbjct 3822 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 3763 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 |||||||| || || | | ||| || | || || || || || || || |||| Sbjct 3762 GTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCA 3703 Query 72262 ATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTA 72321 || ||| || | || || || ||| || | ||| || || || || | || Sbjct 3702 ATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTG 3643 Query 72322 GAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 ||||| | ||||| ||| || | ||| || |||||||| || || ||||||| |||| Sbjct 3642 GAGATGAGAGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCAT 3584 Query 72381 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 72440 | | | ||||| || | || | || ||||| || || || | || || Sbjct 3583 CGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGG 3524 Query 72441 AGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT-CAATAGCTGATTCTA 72499 || ||||| ||||| | || |||| || ||||||| || ||| | | || | Sbjct 3523 CGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGACTGCAAGA-CGCGCTCGA 3465 Query 72500 TATC---CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAA 72556 | || || ||| || || || ||||||||||| | ||| ||||| || | ||| Sbjct 3464 TGTCGTGCCCGTGA---ATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGTTCGG 3408 Query 72557 CGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 72616 ||| |||| | || | ||||||||| || | ||||| || ||||| |||| Sbjct 3407 CGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTGAAGCCAAAGTAGT 3348 Query 72617 TGTATGAAAAGTCTCGTTCGTAAATAA 72643 |||| || || || ||||| |||| Sbjct 3347 TGTAGCCGAAATCGCGGTCGTAGATAA 3321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137807386160