Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_004166.2 Length=44010 Score E Sequences producing significant alignments: (Bits) Value seq75 98.7 3e-16 >seq75 Length=349689 Score = 98.7 bits (108), Expect = 3e-16 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 37746 AGATGGCCCGTGAGCTTGATGTGGTAGTGATAGCACTTTCTCAGTTATCCCGTCAAGTGG 37805 |||| || |||||||| || ||| || || || | || ||| | ||||| |||| Sbjct 64290 AGATCGCGCGTGAGCTGGAAGTGCCGGTCATCGCCTTGTCCCAGCTCTCCCGGGGTGTGG 64231 Query 37806 AACAGCGTCAGGACAAACGACCAATGCTATCGGACTTGCGGGAAAGTGGACAGCTAGAGC 37865 | ||||| ||||||||||| || ||| | || ||| | ||||| || | | |||| Sbjct 64230 AGCAGCGGCAGGACAAACGTCCGATGATGTCCGACCTTCGGGAGTCCGGTTCGATCGAGC 64171 Query 37866 AAGATGCAGACATCATCGAGTTTCTTTACAGGGATGACTATTATGATAAAGAGAGTGAAA 37925 | ||||| || ||| | | ||| || ||| |||| || || || | | || | || | Sbjct 64170 AGGATGCCGATATCGTAGCGTTCCTGTACCGGGACGATTACTACAACCAGGAAACCGAGA 64111 Query 37926 GTAAAAACATTGTTGAGGTTATCATCGCGAAACACCGGGACGGCCCGGTAGGAACTGTG 37984 || ||||| | ||| |||||||||| || || || |||| ||||| || || ||| Sbjct 64110 AGAAGAACATCATCGAGATTATCATCGCCAAGCAGCGTAACGGTCCGGTCGGGACCGTG 64052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140710122624624