Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq81 100 3e-16 >seq81 Length=93598 Score = 100 bits (110), Expect = 3e-16 Identities = 205/300 (68%), Gaps = 10/300 (3%) Strand=Plus/Minus Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997 ||||| || | || |||||| ||| | ||| |||| || | || || |||||| Sbjct 20691 CCGTGCGTCAAGTGACCGCCGTGAGCCAGGTTCATGCCGAGTACGGTGTCGCCAGGCTTC 20632 Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057 || ||| |||| || ||| |||| || |||| |||||||| || || ||||| || Sbjct 20631 AGAGCTGCGAGGTATACAGCCAGGTTAGCCTGTGCGCCGGAATGCGGCTGCACGTTGGCA 20572 Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC---GATTTCATCG 7114 | | | |||||| ||||| || || || ||||| | || ||| || || Sbjct 20571 TGCTCGGCGCCAAACAGCTCTTTGGCGCGGTCGCGGGCCAGATCTTCCACGATGTCTACG 20512 Query 7115 GCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTA 7174 || |||||||||| || || | |||||||||||| || || || || ||||| || Sbjct 20511 TGTT---CGCAGCCGCCGTAGTATCTTTTGCCCGGATAACCTTCCGCGTATTTGTTCGTC 20455 Query 7175 AAAATAGAACCCTGTGCTTTCATAACATCGT--CTGACACATAGTTTTCGGACGCAATCA 7232 || | || ||| |||| |||||| | | |||||| || ||| |||||||| |||| Sbjct 20454 AACACGGAGCCCATAGCTTCCATAACTGCTTCGCTGACA-AT-GTTCTCGGACGCGATCA 20397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555362047621360