Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_005135.1
Length=173591
Score E
Sequences producing significant alignments: (Bits) Value
seq81 100 3e-16
>seq81
Length=93598
Score = 100 bits (110), Expect = 3e-16
Identities = 205/300 (68%), Gaps = 10/300 (3%)
Strand=Plus/Minus
Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997
||||| || | || |||||| ||| | ||| |||| || | || || ||||||
Sbjct 20691 CCGTGCGTCAAGTGACCGCCGTGAGCCAGGTTCATGCCGAGTACGGTGTCGCCAGGCTTC 20632
Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057
|| ||| |||| || ||| |||| || |||| |||||||| || || ||||| ||
Sbjct 20631 AGAGCTGCGAGGTATACAGCCAGGTTAGCCTGTGCGCCGGAATGCGGCTGCACGTTGGCA 20572
Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC---GATTTCATCG 7114
| | | |||||| ||||| || || || ||||| | || ||| || ||
Sbjct 20571 TGCTCGGCGCCAAACAGCTCTTTGGCGCGGTCGCGGGCCAGATCTTCCACGATGTCTACG 20512
Query 7115 GCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTA 7174
|| |||||||||| || || | |||||||||||| || || || || ||||| ||
Sbjct 20511 TGTT---CGCAGCCGCCGTAGTATCTTTTGCCCGGATAACCTTCCGCGTATTTGTTCGTC 20455
Query 7175 AAAATAGAACCCTGTGCTTTCATAACATCGT--CTGACACATAGTTTTCGGACGCAATCA 7232
|| | || ||| |||| |||||| | | |||||| || ||| |||||||| ||||
Sbjct 20454 AACACGGAGCCCATAGCTTCCATAACTGCTTCGCTGACA-AT-GTTCTCGGACGCGATCA 20397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555362047621360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |