Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq68 111 1e-19 >seq68 Length=952209 Score = 111 bits (122), Expect = 1e-19 Identities = 138/188 (73%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 25775 TGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTC 25834 ||||| | |||||||| || |||| |||||| |||||||| || || ||||| | || | Sbjct 226684 TGTCC-TATACTCTGCGCCAAAATGCCTCCATTGGAACCCATAAACTGGTCCCAAATCCC 226742 Query 25835 CATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCC 25894 | |||||||| || | || || || |||||||| | ||| || ||||| | |||| Sbjct 226743 CCTCTTCCCTATGACCCAACCCAACTTTGTCCAAAAACTGTCTCGATCCATTCCCATCCC 226802 Query 25895 AGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACA 25954 | || || |||||||||||||| | ||| || | || || |||| |||||||| | Sbjct 226803 AAATTTTGACCCCCTTCTCGGACAATGATTTAGAATCGGTCGATCCTCGAACGAACCAAA 226862 Query 25955 GCAGCTCC 25962 | || ||| Sbjct 226863 GTAGTTCC 226870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136911859118