Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq79 122 1e-22
>seq79
Length=767515
Score = 122 bits (134), Expect = 1e-22
Identities = 416/643 (65%), Gaps = 4/643 (1%)
Strand=Plus/Minus
Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63256
||| || ||| | ||| || || | ||| |||||||| |||||||| || || | |||
Sbjct 3961 CCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAA 3902
Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316
||||| | | | |||||| || || ||||| ||| || |||||| | |
Sbjct 3901 GAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAA 3842
Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376
| |||| |||||||| || | ||| || || | |||| || || ||||| || ||
Sbjct 3841 GACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACC 3782
Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436
|| || | ||| | ||||||||||| || || | | ||| || | || ||||| ||
Sbjct 3781 TTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGA 3722
Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 63496
|| || || |||| || ||| || | || || || || || | |||
Sbjct 3721 GTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACC 3662
Query 63497 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCATAGATACCCT 63555
|| || || || | || ||||| | ||||| ||| || | |||||| ||||| || |
Sbjct 3661 GATACCACCGGCGGTCTTGGAGATGAGAGCGCA-CGTCTTGAGCGTGTCGTAGATGCCTT 3603
Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615
| || |||||| |||| | | | ||||| || | || | || ||||
Sbjct 3602 CGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTC 3543
Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63675
| || || || | || || || ||||| ||||| | || || | || |||||||
Sbjct 3542 CGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACG 3483
Query 63676 TCT-CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734
|| ||| | | || || || ||||| || || ||||||||||| | ||||
Sbjct 3482 ACTGCAAGA-CGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATG 3424
Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794
||||| || | ||| ||| |||| || || | ||||||||| || | |||
Sbjct 3423 TGCTGCGGGCGTTCGGCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTT 3364
Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63837
|| || ||||| |||||||| || || || ||||| ||||
Sbjct 3363 TTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAA 3321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622945907384560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |