Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq114 113 4e-20 seq70 113 4e-20 seq101 98.7 8e-16 >seq114 Length=793728 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || || | | || || || | ||| || || || || || ||||||||| Sbjct 568181 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 568122 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||| ||||| || || |||||| |||||||||| |||||||| || ||| Sbjct 568121 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 568062 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| |||||| || | | |||| ||||| | ||| ||||| Sbjct 568061 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCGACC 568002 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||| ||||||||||| || || || || || ||||| Sbjct 568001 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567955 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||||||| Sbjct 567728 ATACCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCG 567669 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || || ||| |||| | ||||| ||||| || Sbjct 567668 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGG 567609 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | || | ||||| | ||| ||| Sbjct 567608 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 567549 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||||||||| || || || || || ||||| Sbjct 567548 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567499 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || || ||||| ||| Sbjct 567956 ATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCG 567897 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || ||||| |||| | ||||||||||| || Sbjct 567896 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGG 567837 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| ||| | | |||| ||||| | ||| ||| Sbjct 567836 GGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCG 567777 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||||||||| || || || || |||||||| Sbjct 567776 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567727 >seq70 Length=566626 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||||||| Sbjct 51449 ATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCG 51390 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| || || || || |||||| |||||||||| |||||||| || Sbjct 51389 GCGAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGG 51330 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| ||| | | |||| ||||| | ||| ||| Sbjct 51329 GGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCG 51270 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||||||||| || || || || || ||||| Sbjct 51269 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51220 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || |||||||||||| Sbjct 51905 ATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCG 51846 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || || || |||||||||| |||||||| || Sbjct 51845 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGG 51786 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | |||| ||||| | ||| ||| Sbjct 51785 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGACTCG 51726 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||||||||| || || || || || ||||| Sbjct 51725 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51676 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || || || || | ||| || || || || |||||||| ||| Sbjct 52131 ACCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 52072 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || ||| || || || || ||||| |||| | ||||||||||| || || Sbjct 52071 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGG 52012 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| ||| | | |||| ||||| | ||| ||||| Sbjct 52011 AATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCGAC 51952 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||| ||||||||||| || || || || || ||||| Sbjct 51951 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51904 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | ||| || || || || || ||||| ||| Sbjct 51677 ATACCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCG 51618 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || ||||| |||| | ||||||||||| || Sbjct 51617 GCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGG 51558 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| ||| | | |||| ||||| | ||| ||| Sbjct 51557 GGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACGTTGTCAATCGTGTCCGAGGACTCG 51498 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| ||||||||||| || || || || || ||||| Sbjct 51497 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51448 >seq101 Length=1000389 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || || || | || || || |||||||||||||||||| Sbjct 688354 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGAATGTTGTAATCGGC 688413 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| || ||| || || || || || ||| |||||||||| || ||||| || || Sbjct 688414 GAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCTGGCGG 688473 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||||| ||||| ||||| || | | || | ||||||| || ||||| Sbjct 688474 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 688533 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 || | ||| | || ||||| || || || || ||||| || |||| Sbjct 688534 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 688580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133550015592