Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq79 351 2e-91 seq68 131 3e-25 >seq79 Length=767515 Score = 351 bits (388), Expect = 2e-91 Identities = 843/1264 (67%), Gaps = 30/1264 (2%) Strand=Plus/Minus Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 |||| ||||||| |||||||||||||||||| |||||| | | ||| |||| | Sbjct 4536 TCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCCTCGGGC 4477 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || || ||| |||||| ||||||| || || ||||| ||||||||| Sbjct 4476 GAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCTAGACCTTGCACTCCGATGCCG 4417 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || ||||||| | || ||| ||||| || ||||| ||||| Sbjct 4416 ATGGGGCGGTGACGGAAGTTGGAGTTCTGCGCCTCGATGACGGGATAGTAGTTGACGTCG 4357 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630 || | ||| | |||| | || | |||||| ||| || | || ||||||| Sbjct 4356 ATGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTCGTGCAACTTCTTAAAGTCG 4297 Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690 ||| || | | || || ||| ||| ||| || | ||| |||| Sbjct 4296 TACACGCCG---TTCT------TGATGAAGCTCGGCAACGCGAT-----CGA----GGCC 4255 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 | |||||||||||| ||| |||| | ||||| || ||||||||||| | || Sbjct 4254 AAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAAATTC 4195 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810 ||||||| ||||| |||| || || || || || ||| ||||||||||||| Sbjct 4194 GACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAG 4135 Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870 ||||||||||| || || |||| |||||| |||| | || ||| || | Sbjct 4134 AGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGC 4075 Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930 || || |||| | || ||||| ||||| | ||| ||||| |||| Sbjct 4074 GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAAGGCCTTGAAC 4015 Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990 || ||| |||| |||| || |||||| || ||||| | ||| ||| ||| Sbjct 4014 TCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCG 3955 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 ||| || ||| ||| | || ||||||||| ||||| |||||||| ||| ||||| || Sbjct 3954 CCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCA 3895 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110 | | | || ||| ||| |||||| | || |||| || || |||||||| Sbjct 3894 CGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCA 3835 Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170 ||||||| ||||| | ||||| |||| ||| ||||| ||||||||||| || ||||| Sbjct 3834 GCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCG 3775 Query 245171 ACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCG 245230 || | | || ||| ||| || || | || || |||||||| |||| |||| Sbjct 3774 ACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCG 3715 Query 245231 TTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCG 245290 || ||||| ||||||| ||| | | | || |||| |||| || || | || Sbjct 3714 TTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCA 3655 Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350 |||||| |||||||||||| ||||| |||||| ||||| ||||| || || Sbjct 3654 CCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAA 3595 Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTG 245410 || |||||| ||| || || || || || ||||| || | || | | | |||| Sbjct 3594 TCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTG 3535 Query 245411 AACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTC-GAGAGGAACCCGTACGTCTGGAG 245469 || || || || ||||||||||||||| | |||| || | || ||||| ||| | Sbjct 3534 AAGAGCGTCGGCGAGGCGTGGGTAAAGTA-CCGCTCGGACATGAGGTTGTACGACTGCA- 3477 Query 245470 CAGA-GCG-TCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG- 245526 ||| ||| ||||||| || ||||| || | |||| | |||||| ||||||| Sbjct 3476 -AGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGCTGC 3418 Query 245527 GGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584 |||||| ||| | | || | ||| | |||| |||||||||||||||||| ||| Sbjct 3417 GGGCGT-TCG--GCGACCTTGCCGTCAATGCGAAGCAAGTAGGAGCGCTCGAGCGTTTTG 3361 Query 245585 AACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTCTCTCG 245644 || |||||||| |||||| || ||| || || | ||||| || ||| | ||| Sbjct 3360 AAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAGATAACGGCGCTGTTGAGGCGGTCG 3301 Query 245645 GCGT 245648 |||| Sbjct 3300 GCGT 3297 >seq68 Length=952209 Score = 131 bits (144), Expect = 3e-25 Identities = 187/260 (72%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 42744 GGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTC 42803 ||| | ||||| |||||||||||||||||| || | | |||||||||| | |||||| Sbjct 96852 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 96911 Query 42804 TCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 || ||||| |||||| | |||||||| || || | |||||||| |||||| ||||| Sbjct 96912 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCACACCGACTTTGCTTGCCTCTTGTTC 96971 Query 42864 TCGAGCCACCTCAGGCACAAGCCCTC-GAAGGAGCGGGTCCGGGCCATCATCACGGAGGC 42922 || ||||||| || ||| |||| || ||| | |||||||| |||||| Sbjct 96972 TC---CCACCTCGAGC-GAAGACCTCACCCCGACACCGTCGCGCTCATCATCAAGGAGGC 97027 Query 42923 CGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAA 42982 ||| || || |||||||| ||| | || || | || ||| || |||||||||| Sbjct 97028 CGTCGAAATTGAGAAGGAATTCTTGACCGAGGCTCTTCCCTGCGGTTTGATCGGCATGAA 97087 Query 42983 CCACGACCTCATGTGCAAGT 43002 | | ||||||||| ||| Sbjct 97088 TGCCAAGCTCATGTGCCAGT 97107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337240496160