Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq114 143 6e-29
seq70 140 8e-28
seq67 114 3e-20
>seq114
Length=793728
Score = 143 bits (158), Expect = 6e-29
Identities = 149/194 (77%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||| ||||||||||||||||| || || || | || || || || |||
Sbjct 567917 TCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 567858
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||||| |||||| || || || || |||||||| || | ||| |||
Sbjct 567857 ATCAATCGCTGTTGG---TCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACG 567801
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || ||||||||||||||||| |||||||| ||||||
Sbjct 567800 TTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTG 567741
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 567740 ACGAAGATCTGCAT 567727
Score = 138 bits (152), Expect = 3e-27
Identities = 171/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
||||| || ||||| | || || | || | ||| || || |||||||| || |||
Sbjct 568184 TGTCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCG 568125
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||||||||||| || || || | || || || |||||||| ||||| ||||| |||
Sbjct 568124 GCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGG---TCT 568068
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || ||||| || || || || ||||| || || | || ||
Sbjct 568067 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGAGGAC 568008
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 568007 TCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567955
Score = 127 bits (140), Expect = 5e-24
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || ||||| || || ||||||
Sbjct 567725 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 567666
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|||||||| || || || | || || || |||||||||| ||||| || ||||||
Sbjct 567665 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGG---TCTGGG 567609
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || || || ||||| || || | || || ||
Sbjct 567608 GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 567549
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| |||||||| ||||||||||| || |||||
Sbjct 567548 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567499
>seq70
Length=566626
Score = 140 bits (154), Expect = 8e-28
Identities = 148/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || |||||||| ||||||||||||||||| || || || | || || || || |||
Sbjct 51638 TCCTTCTGGATATTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 51579
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||||| |||||| || || || || |||||||| || | ||| |||
Sbjct 51578 ATCAATCGCTGTTGG---TCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACG 51522
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || ||||||||||||||||| |||||||| ||||||
Sbjct 51521 TTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTG 51462
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 51461 ACGAAGATTTGCAT 51448
Score = 134 bits (148), Expect = 3e-26
Identities = 147/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || |||||||||||||| || || || | || || || ||||||
Sbjct 51410 TCCTTCTGGATGTTGTAATCGGCGAGCGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAG 51351
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||| ||||| |||||| || || || || |||||||| || | ||| |||
Sbjct 51350 ATGAGACGTTGTTGG---TCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACG 51294
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || ||||||||||||||||| |||||||| ||||||
Sbjct 51293 TTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTG 51234
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 51233 ACGAAGATTTGCAT 51220
Score = 134 bits (148), Expect = 3e-26
Identities = 147/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||||||||||||| || || || | || || || || |||
Sbjct 52094 TCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAG 52035
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|||| |||||||| |||||| || || || || |||||||| || | ||| |||
Sbjct 52034 ATCAATCGCTGTTGG---TCTGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGACG 51978
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || ||||||||||||||||| |||||||| ||||||
Sbjct 51977 TTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTG 51918
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 51917 ACGAAGATTTGCAT 51904
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || |||||||||||||| || || || | || || || || |||
Sbjct 51866 TCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAG 51807
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| ||||| ||||| |||||| || || || || || ||||| || || || |||
Sbjct 51806 ATGAGACGTTGTTGG---TCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACG 51750
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || ||||||||||||||||| |||||||| ||||||
Sbjct 51749 TTGTCAATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTG 51690
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 51689 ACGAAGATTTGCAT 51676
>seq67
Length=473732
Score = 114 bits (126), Expect = 3e-20
Identities = 163/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | ||| | || || |||||||| || ||||||||
Sbjct 308838 CCACCTCGGAGGCGGAGGACCAAATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 308897
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
| ||||| || || || | || || || |||||||| ||||| || || |||||
Sbjct 308898 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGG---TCTGGC 308954
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| ||||| || || ||||| || | || ||||| || || | ||| ||| ||
Sbjct 308955 GGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCG 309014
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471
|| ||||| ||||||||||| || || ||||||||||| || || |||
Sbjct 309015 ACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 309062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179651891022548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |