Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq79 208 9e-49 seq98 116 4e-21 seq89 107 2e-18 seq68 84.2 3e-11 seq75 82.4 9e-11 >seq79 Length=767515 Score = 208 bits (230), Expect = 9e-49 Identities = 562/849 (66%), Gaps = 13/849 (2%) Strand=Plus/Minus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 4266 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4207 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || |||||||| || ||| || ||||| | ||||||||| || || || |||| Sbjct 4206 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4147 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| |||||| | || | || || || |||| || |||||| || | | Sbjct 4146 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4087 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 4086 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4028 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 | ||| | |||||||| || | | || ||| || || || | | |||||||| Sbjct 4027 CAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAA 3968 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||| | ||| | || | |||| ||||||| ||||||||| || || |||||||| || Sbjct 3967 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 3908 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 | |||||||| ||| ||| |||| || | || || || || | |||| || Sbjct 3907 CAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3848 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 || | || || ||||||||||| || ||||| | ||||| | || ||| Sbjct 3847 CTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 3788 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| | |||| || || | ||| ||| ||| | || || ||||| || | ||| || Sbjct 3787 GCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCC 3728 Query 115006 ATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | ||| || || || || || ||| | | || | || | |||||| Sbjct 3727 GTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 3670 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| ||||| || || ||| ||||| | |||||| | |||| || ||||| Sbjct 3669 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAG 3610 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || |||||||| ||| |||| | | || | ||| || ||| | || || Sbjct 3609 ATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGA 3550 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACC-TTGGGACATCTT 115242 || || || ||||||||||| || || | |||||| | || |||| | |||||| Sbjct 3549 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACATGAG 3491 Query 115243 ATCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 115301 | ||| | || ||||||| || | ||||| | ||||||||| |||| | ||| |||| Sbjct 3490 GTTGTACGACTGCAAGACGCGCTCG-ATGTCGTGCCCGTGAATGCCGACGGCGACACGCA 3432 Query 115302 TAAACATGT 115310 | | ||||| Sbjct 3431 TGAGCATGT 3423 >seq98 Length=574835 Score = 116 bits (128), Expect = 4e-21 Identities = 292/433 (67%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581 ||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||| Sbjct 430628 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 430570 Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641 | || || | |||| | || | || | ||| |||||||| || || || ||||| Sbjct 430569 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATATGCGATCCATC 430510 Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701 || ||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 430509 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 430450 Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761 | || ||||| || ||||||||||||| ||||| | ||||| ||| || | ||| Sbjct 430449 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 430394 Query 172762 -GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACA 172817 ||| | || | | || || || || || |||| || || | |||||| | Sbjct 430393 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGA 430334 Query 172818 CACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 172877 |||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||||||| Sbjct 430333 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 430274 Query 172878 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 172935 | || || |||| ||||||||| ||||| || | | | ||| || || |||||||| Sbjct 430273 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 430216 Query 172936 ATCGTCCAACTTG 172948 ||| || | |||| Sbjct 430215 ATCTTCGAGCTTG 430203 >seq89 Length=1766943 Score = 107 bits (118), Expect = 2e-18 Identities = 204/298 (68%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 8637 TGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTC 8696 ||| |||| || || ||||| || | || | | | | |||||| |||||| | ||| Sbjct 83434 TGGATCGTCAAAAACTACCGCGAGGCGTACGATATGTACGCGTGCAACGGTATCTTGTTC 83493 Query 8697 AACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATC 8756 ||||||||||| || |||||||| | || || |||| ||||||| || | | || Sbjct 83494 AACCACGAGTCCCCGCGTCGTGGTCGCACCTTTGTCACAAGGAAGATCTCCCGAGCTGTC 83553 Query 8757 AAACAAATCGTCGCG-GGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAG 8815 | ||| |||| ||| | ||| | | | | | || || | | ||| || | Sbjct 83554 GCCGAGATC-TCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCG 83612 Query 8816 GGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGA 8875 || ||||||||||| ||||| || || | |||||| | || || ||||| | Sbjct 83613 TGATTGGGGACACGCGTGCGACTACGTCGAGGGTATGTGGAGGATGCTGCAGCAAGACAA 83672 Query 8876 GGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933 | | ||||| | |||| |||||||||| ||||| ||| |||||| ||||||||| ||| Sbjct 83673 GCCTGACGACTTTGTCCTCGCGACGGGTGAGACCCACCCCGTCAAGGAGTTCGTCGAG 83730 >seq68 Length=952209 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || || || || |||||||| ||| || || || || ||||||| ||| | Sbjct 278741 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 278682 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 278681 ACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 278622 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || | | | |||||| |||||| ||||||||||||||| Sbjct 278621 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 278562 Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744 || ||||| ||||||| ||||| || | |||||| Sbjct 278561 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 278523 >seq75 Length=349689 Score = 82.4 bits (90), Expect = 9e-11 Identities = 247/380 (65%), Gaps = 6/380 (2%) Strand=Plus/Minus Query 10775 ACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATG 10834 || ||||| | ||| ||||| || ||||| ||||| | || || || || || Sbjct 172973 ACCGTGATTTGACGGTCAAAACGGCCTGGACGGAGCAACGCCGGATCCAGAATGTCCGGA 172914 Query 10835 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCA---AAGCCATCCATCTCA 10891 ||||| || ||||| | || | ||| || || ||| | ||||| ||||| ||| Sbjct 172913 CGGTTGGTTGCCGCCACGATGATGATACCT---TCATTAGCGCCGAAGCCGTCCATTTCA 172857 Query 10892 GTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCACCCGCACTG 10951 | | || |||| |||||| |||||||| |||| | || | || || | | Sbjct 172856 ACGAGCAACTGGTTGAGGGTTTGCTCGCGTTCGTCATGCCCGCCGCCAAGTCCGGCGCCG 172797 Query 10952 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGG 11011 || || || || |||||||||||||| || || | ||||| || ||| | Sbjct 172796 CGCTGACGGCCTACAGCGTCAATTTCATCAATAAAGATAATACATGGGGCATTCTTCTTA 172737 Query 11012 GCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAA 11071 ||| || || | || ||||| | ||||| || || || |||||||||||||| Sbjct 172736 GCATTCTCGAACAAGTCGCGGACACGGGATGCACCCACGCCGACGAACATTTCCACAAAG 172677 Query 11072 TTGGCGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 11131 | || ||||| || ||| || ||| | ||| || || | ||||| ||| ||| Sbjct 172676 TCGGAACCGGAAATGCTGAAGAACGGTACGCCAGCTTCGCCTGCTACGGCTCTGGCAAGG 172617 Query 11132 AGGGTCTTCCCCGTCCCAGG 11151 || ||||| || || || || Sbjct 172616 AGTGTCTTACCTGTTCCCGG 172597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352360491280