Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq79 268 9e-67 >seq79 Length=767515 Score = 268 bits (296), Expect = 9e-67 Identities = 740/1126 (66%), Gaps = 29/1126 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| ||||||||| || ||| || ||| | || || || |||| | Sbjct 3344 TACAACTACTTTGGCTTCAAAACGCTCGAGCGCTCCTACTTGCTTCGCATTGACGGCAAG 3403 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| ||||| |||||| |||| |||||||| |||||| Sbjct 3404 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGAC 3463 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | | | || |||| || | |||| |||| ||| Sbjct 3464 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGA---GCGGTACTTTACCCACGCC 3520 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || ||||||||| || | Sbjct 3521 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCTTGGTC 3580 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 |||| |||| || || ||| || || | ||||| |||||| || || |||| Sbjct 3581 ACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCTCTCATC 3640 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || |||||| Sbjct 3641 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTAC 3700 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||| || || ||| ||| |||||| ||||||| |||||||| |||| ||| ||| Sbjct 3701 ATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAAC 3760 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 3761 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 3820 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 3821 GAGCCGTGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 3880 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 | | || | || ||||| | || |||||| | || || || || ||| | || Sbjct 3881 GAAGTCCGCGCTCGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGT 3940 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || |||| || || || ||| ||| ||||| || ||| Sbjct 3941 GTCGAGGCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAA 4000 Query 94375 GTTTGTGGATCG-CGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 || | ||| || | || || | ||||| | |||||| | |||| |||| Sbjct 4001 GTCTATGG--CGAAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCA 4058 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 |||| || || ||||| ||| | || | || | ||||| || || | Sbjct 4059 AGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTG 4118 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | | |||| ||| | | ||||||| | | ||| || || ||||| || |||| | Sbjct 4119 GCAACCCCTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTG 4178 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||||||| |||||| ||||||||||||| ||||||| | | ||||||||| Sbjct 4179 GCACGATCAAGTCGTCGAATTTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGT 4238 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACG 94671 || || || ||| ||| ||| ||| || | | ||| | | ||| || || Sbjct 4239 GCGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCG 4292 Query 94672 TCTACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAA 94730 | ||| ||| | | | || | ||| | || || | | | | || || Sbjct 4293 TGTACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTTG---------TCGCTTTCAA 4341 Query 94731 CCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCT 94790 | ||||| | | |||||| |||| ||| |||||| |||||| ||||||| ||| | Sbjct 4342 CTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGAGGCGCAGAACTCCAACTT 4401 Query 94791 GAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| | || |||||| Sbjct 4402 CCGTCACCGCCCCATCGGCATCGGAGTGCAAGGTCTAGCCGACGCG 4447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722173449360