Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq101 149 7e-31
seq114 140 4e-28
seq67 140 4e-28
seq70 138 1e-27
>seq101
Length=1000389
Score = 149 bits (164), Expect = 7e-31
Identities = 164/215 (76%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||||||||| || ||||| |||| |||||||| | || ||||||||||||||||||||
Sbjct 688390 CTCCTTTTGAATGTTGTAATCGGCGAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 688449
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||| | ||| | || |||||||| |||||| |||||| |||
Sbjct 688450 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 688508
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| ||| || || || | |||||||| |||||||| || || || |
Sbjct 688509 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 688568
Query 46581 CAAAGATTTGCATTTTGCACAAACAACACGCCGAA 46615
|||||||||||| | | ||| || |||| ||||
Sbjct 688569 CAAAGATTTGCACTGTAAACAGAC--CACGACGAA 688601
>seq114
Length=793728
Score = 140 bits (154), Expect = 4e-28
Identities = 178/241 (74%), Gaps = 3/241 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||| | ||| | ||||| |||| || |||||| ||||| ||||| ||||
Sbjct 567725 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 567666
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || |||||||||||||| ||||| ||||| ||||||||||| | ||
Sbjct 567665 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 567606
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545
| || |||||||||| ||||| ||||| ||| | | | |||||| || || ||
Sbjct 567605 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGAC 567547
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAACA 46605
|| | |||||| || ||||| ||||| || || || |||||||||| | || |||| ||
Sbjct 567546 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCA-TCTGAACAAGCA 567488
Query 46606 A 46606
|
Sbjct 567487 A 567487
Score = 134 bits (148), Expect = 2e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| | ||| | ||||| || | || |||||| ||||||||||||||||
Sbjct 567953 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 567894
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || |||||||||||||| || || ||||| ||||| ||||| | ||
Sbjct 567893 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 567834
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545
| | |||||||||| |||||| | |||| ||| | | | |||||| || || ||
Sbjct 567833 ATACCCTCCTTGTCCTGGATCTTGGTTTTGA-CGTTGTCAATCGTGTCCGAGGACTCGAC 567775
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||| || ||||| ||||| || || || ||||| |||||
Sbjct 567774 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 567727
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||| | ||| | ||||| |||| || |||||| ||||||||||| ||||
Sbjct 568181 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 568122
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || ||||||||||| ||||| || | || || ||||| | ||
Sbjct 568121 AGCGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 568062
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCAC 46545
| || |||||||||| ||||| ||||| ||| | || |||||| || || ||
Sbjct 568061 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGAC 568003
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||| || ||||| ||||| || || || |||||||||||
Sbjct 568002 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 567955
>seq67
Length=473732
Score = 140 bits (154), Expect = 4e-28
Identities = 147/191 (77%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| |||||||||| | ||||| | || ||||||||||||||||||||
Sbjct 308873 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 308932
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || |||||||| | ||| | || |||||||| |||||| |||||| |||
Sbjct 308933 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 308991
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| ||| || || || | ||||| || |||||||| || || || |
Sbjct 308992 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 309051
Query 46581 CAAAGATTTGC 46591
|||||||||||
Sbjct 309052 CAAAGATTTGC 309062
>seq70
Length=566626
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| | ||| | ||||| || | || |||||| ||||||||||||||||
Sbjct 51674 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCGGCG 51615
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || |||||||||||||| || || ||||| ||||| ||||| | ||
Sbjct 51614 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCTGGGGGA 51555
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCAC 46545
| | |||||||||| |||||| | |||| ||| | || |||||| || || ||
Sbjct 51554 ATACCCTCCTTGTCCTGGATCTTGGTTTTGA-CGTTGTCAATCGTGTCCGAGGACTCGAC 51496
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||| || ||||| ||||| || || || |||||||||||
Sbjct 51495 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51448
Score = 132 bits (146), Expect = 5e-26
Identities = 172/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||||| || || | | ||||| ||||| || | || |||||| ||||| |||||
Sbjct 52137 TTATTGACCCCCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTA 52078
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
||||| || ||||| | || |||||||||||||| || || ||||| ||||| |||||
Sbjct 52077 GTCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTC 52018
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCG 46538
| || | | |||||||||| |||||| | |||| ||| | || |||||| |
Sbjct 52017 TGGGGGAATACCCTCCTTGTCCTGGATCTTGGTTTTGA-CGTTGTCAATCGTGTCCGAGG 51959
Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || || || | |||||| || ||||| ||||| || || || |||||||||||
Sbjct 51958 ACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51904
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| | ||| | ||||| || | || |||||| ||||| ||||| ||||
Sbjct 51446 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 51387
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || |||||||||||||| ||||| || | || || ||||| | ||
Sbjct 51386 AGCGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGA 51327
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCAC 46545
| | |||||||||| |||||| | |||| ||| | || |||||| || || ||
Sbjct 51326 ATACCCTCCTTGTCCTGGATCTTGGTTTTGA-CGTTGTCAATCGTGTCCGAGGACTCGAC 51268
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||| || ||||| ||||| || || || |||||||||||
Sbjct 51267 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51220
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| | ||| | ||||| || | || |||||| ||||| ||||| ||||
Sbjct 51902 CCTCCTCGGAGACGGAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCG 51843
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || |||||||||||||| || || || | || || ||||| | ||
Sbjct 51842 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATGAGACGTTGTTGGTCTGGGGGA 51783
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCAC 46545
| || ||||||||| |||||| ||||| ||| | || |||||| || || ||
Sbjct 51782 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGAGGACTCGAC 51724
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | |||||| || ||||| ||||| || || || |||||||||||
Sbjct 51723 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 51676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237227130320
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