Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq68 185 9e-42 seq70 152 5e-32 seq114 143 3e-29 seq101 136 4e-27 seq67 131 2e-25 seq98 91.5 1e-13 >seq68 Length=952209 Score = 185 bits (204), Expect = 9e-42 Identities = 175/223 (78%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||||||||| ||||| ||||| || |||||| | ||| || || || ||| ||||| Sbjct 96361 GATTTGAAAACCGTAGAAGCATCGAGCCTCGGCTGACTGGACCTCACCAGAGAATCGCTC 96302 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 ||||| || |||||||||||||||||| ||||||||||||||| || |||||| ||| Sbjct 96301 GACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGAT 96242 Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| | |||||||| | | | | | ||||||||| || |||||||||||| ||| Sbjct 96241 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 96182 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437 || ||| ||| |||||||||| || |||||||| || |||||| Sbjct 96181 CATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCCTTCTTGTAC 96139 Score = 89.7 bits (98), Expect = 5e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||||| | ||||||||||||| || | ||||||||| | || ||||| |||||| Sbjct 96971 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 96912 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 ||| ||||| |||||||| | ||| || || |||||||| || |||| ||||| Sbjct 96911 GAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAA 96858 >seq70 Length=566626 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 51220 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51279 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | ||| || |||| ||||| ||||| |||||| | ||||| Sbjct 51280 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 51338 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||| | ||| ||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 51339 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACGCTCGCCGATTACAA 51398 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| ||||||| || |||||||| ||| | |||| || Sbjct 51399 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 51446 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 51676 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51735 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 51736 GACACGATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 51794 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||| | |||||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 51795 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 51854 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| ||||||| || |||||||| ||| | |||| || Sbjct 51855 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 51902 Score = 150 bits (166), Expect = 2e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 51904 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51963 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | ||| || |||| ||||| ||||| |||||| | ||||| Sbjct 51964 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 52022 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 52023 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 52082 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||||| || |||||||||||| Sbjct 52083 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGT 52119 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 51448 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51507 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | ||| || |||| ||||| ||||| |||||| | ||||| Sbjct 51508 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 51566 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 51567 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 51626 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||||||| || |||||||| ||| | |||| || Sbjct 51627 TATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 51674 >seq114 Length=793728 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 567499 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567558 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| |||||| | ||||| Sbjct 567559 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 567617 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||||||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 567618 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 567677 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||||||||| |||||||| ||| | |||| || Sbjct 567678 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 567725 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || ||||| |||| |||||| || | Sbjct 567727 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567786 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | ||| || |||| ||||| ||||| |||||| | ||||| Sbjct 567787 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 567845 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 567846 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 567905 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||||||| || |||||||| ||| | |||| || Sbjct 567906 TATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 567953 >seq101 Length=1000389 Score = 136 bits (150), Expect = 4e-27 Identities = 163/216 (75%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304 ||||||| || || || || ||||||||||| ||||||||| |||| |||||| | ||| Sbjct 688580 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 688521 Query 38305 ACAGCGTGCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 ||| || | | | | |||| || |||| ||||| || || | ||||||| ||||| Sbjct 688520 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCA-TCCCGCCAGACCA 688463 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | ||| ||||| ||||| || || | ||||| ||| ||| ||||| Sbjct 688462 GCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAA 688403 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| |||||||| |||| || || |||||||| || Sbjct 688402 CATTCAAAAGGAGTCGACCCTCCACTTGGTGCTCCG 688367 >seq67 Length=473732 Score = 131 bits (144), Expect = 2e-25 Identities = 169/228 (74%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305 |||||| || || || || || |||||||| || |||||| |||| |||||| | |||| Sbjct 309062 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 309003 Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363 || || | | | | |||| || |||| ||||| || || || |||||| ||||| Sbjct 309002 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 308945 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | ||| ||||| ||||| || || | |||||| | |||||||||| Sbjct 308944 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 308885 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| |||| || |||||||| || || | |||| ||| Sbjct 308884 ATCCAAAAGGAGTCGACCCTCCATTTGGTCCTCCGCCTCCGAGGTGGC 308837 >seq98 Length=574835 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| |||||| | | || || ||| ||| | || ||||| | ||| ||||| Sbjct 179741 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 179800 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 |||||| ||||| | ||| ||||||||||| ||||||||||||||||| |||| ||| Sbjct 179801 CTCGTTGGAGAAAGAGAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAAGATGGAGGC 179860 Query 132996 GAA 132998 ||| Sbjct 179861 GAA 179863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171762141440