Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq68 185 9e-42
seq70 152 5e-32
seq114 143 3e-29
seq101 136 4e-27
seq67 131 2e-25
seq98 91.5 1e-13
>seq68
Length=952209
Score = 185 bits (204), Expect = 9e-42
Identities = 175/223 (78%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
||||||||| ||||| ||||| || |||||| | ||| || || || ||| |||||
Sbjct 96361 GATTTGAAAACCGTAGAAGCATCGAGCCTCGGCTGACTGGACCTCACCAGAGAATCGCTC 96302
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
||||| || |||||||||||||||||| ||||||||||||||| || |||||| |||
Sbjct 96301 GACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGAT 96242
Query 133338 GAAATGGCGCTCGTTG---TCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
||| | |||||||| | | | | | ||||||||| || |||||||||||| |||
Sbjct 96241 GAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTTGGACAAGTC 96182
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTAC 133437
|| ||| ||| |||||||||| || |||||||| || ||||||
Sbjct 96181 CATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCCTTCTTGTAC 96139
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| | ||||||||||||| || | ||||||||| | || ||||| ||||||
Sbjct 96971 GAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTCGTCACGCGAGATGAGCTCGTTGGA 96912
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998
||| ||||| |||||||| | ||| || || |||||||| || |||| |||||
Sbjct 96911 GAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAAGCGAA 96858
>seq70
Length=566626
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 51220 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51279
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | ||| || |||| ||||| ||||| |||||| | |||||
Sbjct 51280 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 51338
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || ||||| | ||| ||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 51339 ACAACGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACGCTCGCCGATTACAA 51398
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| ||||||| || |||||||| ||| | |||| ||
Sbjct 51399 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 51446
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 51676 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51735
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | || | || |||| ||||| ||||| |||||| | |||||
Sbjct 51736 GACACGATTGACAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 51794
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || ||||| | |||||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 51795 ACAACGTCTCATCTTTGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 51854
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| ||||||| || |||||||| ||| | |||| ||
Sbjct 51855 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 51902
Score = 150 bits (166), Expect = 2e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 51904 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51963
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | ||| || |||| ||||| ||||| |||||| | |||||
Sbjct 51964 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 52022
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | || ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 52023 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 52082
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| ||||||| || ||||||||||||
Sbjct 52083 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCGT 52119
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 51448 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 51507
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | ||| || |||| ||||| ||||| |||||| | |||||
Sbjct 51508 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 51566
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | || ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 51567 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 51626
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || |||||||| ||| | |||| ||
Sbjct 51627 TATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 51674
>seq114
Length=793728
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 567499 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567558
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||| ||||| |||||| | |||||
Sbjct 567559 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCA 567617
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| | || | ||||||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 567618 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 567677
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||||||||| |||||||| ||| | |||| ||
Sbjct 567678 CATCCAGAAGGAGTCGACGCTGCACTTGGTGCTCCGTCTCCGAGGTGG 567725
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| || ||||| |||| |||||| || |
Sbjct 567727 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 567786
Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | || |||| | ||| || |||| ||||| ||||| |||||| | |||||
Sbjct 567787 GACACGATTGACAACG-TCAAAACCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 567845
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | || ||||| ||||| || || | ||||| ||| |||||||||
Sbjct 567846 ACAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGACTACAA 567905
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || |||||||| ||| | |||| ||
Sbjct 567906 TATCCAGAAGGAGTCGACGCTCCACTTGGTGCTCCGTCTCCGAGGAGG 567953
>seq101
Length=1000389
Score = 136 bits (150), Expect = 4e-27
Identities = 163/216 (75%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || ||||||||||| ||||||||| |||| |||||| | |||
Sbjct 688580 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 688521
Query 38305 ACAGCGTGCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
||| || | | | | |||| || |||| ||||| || || | ||||||| |||||
Sbjct 688520 ACA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCA-TCCCGCCAGACCA 688463
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | ||| ||||| ||||| || || | ||||| ||| ||| |||||
Sbjct 688462 GCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGATTACAA 688403
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| |||||||| |||| || || |||||||| ||
Sbjct 688402 CATTCAAAAGGAGTCGACCCTCCACTTGGTGCTCCG 688367
>seq67
Length=473732
Score = 131 bits (144), Expect = 2e-25
Identities = 169/228 (74%), Gaps = 4/228 (2%)
Strand=Plus/Minus
Query 38246 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGA 38305
|||||| || || || || || |||||||| || |||||| |||| |||||| | ||||
Sbjct 309062 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 309003
Query 38306 CAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GACCAA 38363
|| || | | | | |||| || |||| ||||| || || || |||||| |||||
Sbjct 309002 CA-CGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCAT-CCCGCCAGACCAG 308945
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | ||| ||||| ||||| || || | |||||| | ||||||||||
Sbjct 308944 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 308885
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||| |||| || |||||||| || || | |||| |||
Sbjct 308884 ATCCAAAAGGAGTCGACCCTCCATTTGGTCCTCCGCCTCCGAGGTGGC 308837
>seq98
Length=574835
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| |||||| | | || || ||| ||| | || ||||| | ||| |||||
Sbjct 179741 CAAATGACTGAACAAGAGGACGGCGAATTCGGTATGAAGACCTTCGTCGCGGGATATGAG 179800
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
|||||| ||||| | ||| ||||||||||| ||||||||||||||||| |||| |||
Sbjct 179801 CTCGTTGGAGAAAGAGAGGCCAGGCATGAGGCCTCGTTTTTTGAGCCAAAAGATGGAGGC 179860
Query 132996 GAA 132998
|||
Sbjct 179861 GAA 179863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171762141440
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