Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_014636.1
Length=225268
Score E
Sequences producing significant alignments: (Bits) Value
seq56 87.8 3e-12
seq85 84.2 3e-11
>seq56
Length=175490
Score = 87.8 bits (96), Expect = 3e-12
Identities = 83/105 (79%), Gaps = 1/105 (1%)
Strand=Plus/Minus
Query 191864 GTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCAAC 191923
||| ||| ||| ||||||||||| ||||| | | ||||||||||| | ||||||||||||
Sbjct 121160 GTGAGCCATGAAGGACTCGAACCTTCGACACCCTGATTAAAAGTCAGGTGCTCTACCAAC 121101
Query 191924 TAAGCTAACGGCGCGTTGTTTGGCAGGGGCGGTAGGAGTCGAACC 191968
| |||||| ||| | | |||| |||| ||||| |||||||
Sbjct 121100 TGAGCTAATGGCTC-ATAAATGGCTGGGGATATAGGATTCGAACC 121057
>seq85
Length=75362
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 191864 GTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCAAC 191923
||| ||| ||| ||||||||||| ||||| | | ||||||||||| | ||||||||||||
Sbjct 1834 GTGAGCCATGAAGGACTCGAACCTTCGACACCCTGATTAAAAGTCAGGTGCTCTACCAAC 1893
Query 191924 TAAGCTAACGGCGCGT 191939
| |||||| ||| |||
Sbjct 1894 TGAGCTAATGGCTCGT 1909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 720728104486080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |