Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq56 87.8 3e-12 seq85 84.2 3e-11 >seq56 Length=175490 Score = 87.8 bits (96), Expect = 3e-12 Identities = 83/105 (79%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 191864 GTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCAAC 191923 ||| ||| ||| ||||||||||| ||||| | | ||||||||||| | |||||||||||| Sbjct 121160 GTGAGCCATGAAGGACTCGAACCTTCGACACCCTGATTAAAAGTCAGGTGCTCTACCAAC 121101 Query 191924 TAAGCTAACGGCGCGTTGTTTGGCAGGGGCGGTAGGAGTCGAACC 191968 | |||||| ||| | | |||| |||| ||||| ||||||| Sbjct 121100 TGAGCTAATGGCTC-ATAAATGGCTGGGGATATAGGATTCGAACC 121057 >seq85 Length=75362 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 191864 GTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCAAC 191923 ||| ||| ||| ||||||||||| ||||| | | ||||||||||| | |||||||||||| Sbjct 1834 GTGAGCCATGAAGGACTCGAACCTTCGACACCCTGATTAAAAGTCAGGTGCTCTACCAAC 1893 Query 191924 TAAGCTAACGGCGCGT 191939 | |||||| ||| ||| Sbjct 1894 TGAGCTAATGGCTCGT 1909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720728104486080