Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq96 374 1e-98 seq48 167 3e-36 seq100 156 5e-33 seq123 111 2e-19 seq136 100 4e-16 seq89 86.0 8e-12 seq98 84.2 3e-11 >seq96 Length=2270354 Score = 374 bits (414), Expect = 1e-98 Identities = 660/960 (69%), Gaps = 5/960 (1%) Strand=Plus/Minus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 1810397 TCACCAGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 1810338 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | || ||| Sbjct 1810337 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTGGGG 1810278 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| || Sbjct 1810277 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAA 1810218 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| || ||||| || ||||| |||||||||||| |||| ||| Sbjct 1810217 TCGCGAAGGACCTTCTCGACGGGGTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 1810158 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | || ||| | | ||| || || Sbjct 1810157 TCGAAGCGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 1810098 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | ||||| | |||||||| || ||||| || || || || Sbjct 1810097 TCGATGGTAGTCTGGGCGGCGGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 1810038 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||||||||| | || || || ||||| Sbjct 1810037 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCTTTCTTGTTCTTGCGCTTGAACTCG 1809978 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 1809977 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 1809918 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | || | || ||||| ||||| Sbjct 1809917 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 1809858 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || || || ||||| |||||| | ||| | | | ||||| ||||| ||| Sbjct 1809857 CCTCCTCCGAGATCGAAGATGAGGACGTTCTTCTCGCCAACGGTCTTCTTGTCGAGGCCG 1809798 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||||||||| || ||| ||||| | || Sbjct 1809797 TAAGCGATGGCGGCAGCAGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 1809738 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||||||||| |||||||| ||||| || ||| Sbjct 1809737 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAATCGTTGAAGTAGGCGGGGACAGTGACG 1809678 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | || || || | || ||| | || ||||| ||| || Sbjct 1809677 ACGGCGTTGGAGACGGTCGTGCCCAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGCAGG 1809618 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849 | ||| || || || || || | | ||||| || || || || |||| || | Sbjct 1809617 ATCATGGACGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCCTCGGTAATCGACCTGG 1809558 Query 7850 ATCATGGGTTTATCCGCAG-CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908 || | ||| || | || | | ||| ||||| | | ||| | ||||| ||| Sbjct 1809557 ATGACGGGCTT----GGAGTCCTTGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGGA 1809502 Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968 ||||||| || || |||||| || || || ||||| ||||| || || ||||| Sbjct 1809501 CTGGACCTCGCTATCGGACCACTTTCGGCCAATGAGTCGCTTGGCATCGAAGACGGTGTT 1809442 >seq48 Length=2602331 Score = 167 bits (184), Expect = 3e-36 Identities = 525/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Minus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 763712 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 763653 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| || | || || | || || | | || || || ||||| Sbjct 763652 CGACTTGTTCAATTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 763593 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 763592 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 763533 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 || || ||||| || || | | | | ||||| | | | |||| Sbjct 763532 CTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 763474 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | || || ||||||| || || | | |||| || || | | | | ||| || | | Sbjct 763473 CGAACCGGGCACGGGAGATCGAGGCAGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 763414 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 763413 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 763354 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| || |||||||||| |||| || || ||| | || | | |||||| | Sbjct 763353 GACGACGGAGAGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 763294 Query 7431 CAGAGAAGTG-TCGAAGGAGTC-TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| || ||| | | | | || || || |||||||||||||| || || || Sbjct 763293 TCTTGAAGTGCTCCAAGAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 763236 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 || || || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 763235 AGCAGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 763176 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATC-------GTCGTCT--TTGTTCTT 7599 || || || || || || ||||| ||| | | || | | ||| || || Sbjct 763175 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTGGACTTCTCGGTGGCCTC 763116 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | |||||||| ||||| || || || || || || || || ||||| || || || Sbjct 763115 ACCCAGACCGTAGGCGATTGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 763056 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 763055 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 762996 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 762995 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 762936 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||| ||||| || || ||||| Sbjct 762935 CTTGGAAAGGACCATGGACGAGATCTC 762909 Score = 107 bits (118), Expect = 2e-18 Identities = 116/153 (76%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || |||||||| || ||||| Sbjct 762654 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACGTAAGAAGGGGT 762598 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 762597 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 762538 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 762537 GCAGGAGTAGGTGGTTCCAAGATCGATACCTAT 762505 >seq100 Length=1345518 Score = 156 bits (172), Expect = 5e-33 Identities = 231/327 (71%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 64765 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 64706 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 64705 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 64646 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 64645 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 64589 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | | || ||| |||||| || || || || | || || || |||||||||||| Sbjct 64588 TTGACGACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 64529 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 64528 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 64469 Query 7757 TACGATTCCGCGATATCTTTCATTTTG 7783 || | || ||| | || ||||| ||| Sbjct 64468 TAGGCCTCGGCGGTCTCCTTCATCTTG 64442 >seq123 Length=42994 Score = 111 bits (122), Expect = 2e-19 Identities = 250/363 (69%), Gaps = 16/363 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || ||||| || | ||| | || || ||| ||||| ||||| |||| || Sbjct 24318 TCAAAGTCGTCACCGCCGAGGTGGTTGTCACCGCTGGTGGCTTTAACTTCGAAGAAGCCG 24377 Query 7517 CCTTCAATGTTTAACAACG-AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | | | ||| || || | |||| ||||| ||||| || || |||||||| | ||| | Sbjct 24378 TCGCCGA-GTTCAAGAATGGAAACGTCAAAGGTACCGCCGCCAAGGTCAAACACGAGGA- 24435 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | || || | | || || |||||||| || | |||||||||||||||||| Sbjct 24436 --TCGTTTGATCTTCC--GATTTT-TCCAGACCGTAAGCAAGAGCCGCCGCCGTTGGTTC 24490 Query 7636 ATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 || | ||||| || || ||| || || || || | |||| ||||| || ||||| | Sbjct 24491 GTTGACGATACGCAG-CACTTCGAGACCCGCGATTTTACCCGCGTCTTTAGTTGCTTGGC 24549 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || ||||| ||||| ||||| || || | ||||| | || || | || | Sbjct 24550 GCTGGCTGTCGTTGAAGTAAGCCGGAACGGTAATAACCGCTTGGGTTACCGGTTGGCCCA 24609 Query 7755 GATACGATTCCGCGATAT-CTTTCA--TTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 ||| | |||||| || | |||||| ||||| ||||| |||| || || |||| || Sbjct 24610 AATAAGCTTCCGC-ATCTGCTTTCAGCTTTTG--AAGAATGATCGCGGAGATTTCTTGAG 24666 Query 7812 CCG 7814 || Sbjct 24667 GCG 24669 >seq136 Length=578008 Score = 100 bits (110), Expect = 4e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || || || | ||| || || || Sbjct 292373 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTGATGACACGGAGCACGTCAAGA 292432 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 292433 CCCGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 292492 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 292493 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 292552 Query 7781 TTG 7783 ||| Sbjct 292553 TTG 292555 >seq89 Length=1766943 Score = 86.0 bits (94), Expect = 8e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22585 TACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGAATCACCGAGACGGGGTGAA 22644 |||| ||||| || ||||| ||||| ||||||||||||| || ||| | || ||| Sbjct 83461 TACGATATGTACGCGTGCAACGGTATCTTGTTCAACCACGAGTCCCCGCGTCGTGGTCGC 83520 Query 22645 AACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATATCAGTGCAGGTAAACAAAAA 22704 | ||| || ||| | || || | | | |||||| | ||| ||| |||| | Sbjct 83521 ACCTTTGTCACAAGGAAGATCTCCCGAGCTGTCGCCGAGATCTCGCTCGGTCAACAGGAC 83580 Query 22705 TGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGGTCATGCACGCGATTACGTG 22764 || | ||||| || || | || || || || |||||||| || || |||| ||||| Sbjct 83581 TGCCTCTACCTCGGCAATATGGAGGCCAAGCGTGATTGGGGACACGCGTGCGACTACGTC 83640 Query 22765 AAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGATTTTGT 22811 | ||||||||| || | || ||||| || || || || ||||| Sbjct 83641 GAGGGTATGTGGAGGATGCTGCAGCAAGACAAGCCTGACGACTTTGT 83687 >seq98 Length=574835 Score = 84.2 bits (92), Expect = 3e-11 Identities = 220/334 (66%), Gaps = 4/334 (1%) Strand=Plus/Minus Query 184049 ATAAGTCCCTTGATATGACTTCCATCGTTATCTGCATCGGTCATGATCATGAGTCTTCCG 184108 || || ||||||||||| |||||||| |||| ||||| |||||||||||| | ||| Sbjct 430535 ATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCCG 430476 Query 184109 TATCTGAGTTCGGAGAGTGATGTATACACTTTCCCTTGCTGAAGCCCCAAAATCTTTTTA 184168 || | ||| | || || || ||||| || ||||| || ||||| |||| || Sbjct 430475 TAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTG 430416 Query 184169 AGATCATTAAACTCCTTGTTTTCGGTAAGTTGTTTTACACTCGCGTCACGCACGTTCTTA 184228 | | | || ||| || ||| || ||| | ||| ||||||||||| Sbjct 430415 ATCGCTTGAATCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGC 430356 Query 184229 CATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCA 184288 | || || | | || || ||||| || | || ||||| || || | ||||| | Sbjct 430355 AACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAG 430296 Query 184289 ATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTT--ACCAGAGT 184346 | || || | || || ||||| |||||||| | || || || ||||| ||| || Sbjct 430295 ACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTGGACC--CGT 430238 Query 184347 GTGTGGTACCGGCTTTATTGGCATCGTCGAGTTT 184380 | ||||| || || || ||||| ||||| || Sbjct 430237 TCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTT 430204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131482099440