Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq79 176 6e-39
seq98 134 2e-26
seq89 120 4e-22
seq68 98.7 1e-15
>seq79
Length=767515
Score = 176 bits (194), Expect = 6e-39
Identities = 515/784 (66%), Gaps = 21/784 (3%)
Strand=Plus/Plus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||| ||| ||||| ||||||| ||||| |||| || || ||| | || || || ||
Sbjct 3415 CCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGACATCGAGCGCGT 3474
Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729
||| || | ||| || |||||| | |||| || | |||||| | || || ||||
Sbjct 3475 CTTGCAGTCGTACAACCTCATGTCCGAGCGGTACTTT-ACCCACGCCTCGCCGACGCTCT 3533
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || || || || || | || |||||| | | | | ||||| |
Sbjct 3534 TCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCTTGGTCACGATGAAGGATG 3593
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
|||| ||| | ||||| |||| ||| |||| || || | ||||| ||| || |
Sbjct 3594 ATTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCTCTCATCTCCAAGACCGCCG 3653
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907
|||||||||| || |||||| | || | || | | | ||| || || || ||
Sbjct 3654 GTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACC--GGCTCCTACATTGCCGGCAC 3711
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| || | || | || || | || ||||| || || | || ||| ||||||||
Sbjct 3712 GAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAACACCGCGCGCTA 3771
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
|| |||||| ||| ||||| | ||| | |||| |||| || ||||| ||
Sbjct 3772 CGTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTG 3828
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079
|||||| || || | |||||||| || | || ||||| || | ||||| | ||
Sbjct 3829 GCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCG 3888
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
|| | || |||||||| | || ||||||||||| |||||||||||| || | || |||
Sbjct 3889 CGCT--CGTGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAG 3946
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
| ||| | ||| | ||||| || || | | | || ||||||||| ||| | |
Sbjct 3947 GCCGCCGGCGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAAGTCTAT 4006
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259
|| || ||||| | ||| | | | || ||||| | || |||| || | ||||
Sbjct 4007 GGCGAAGAGTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAAGACG 4066
Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318
| || || || | | | ||| | || |||||| || | || ||| ||||| | ||
Sbjct 4067 ATCCCCGC-GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCC 4125
Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378
| ||||| ||||| |||||| ||| | || || |||||||| | || |||
Sbjct 4126 CTTCATGCTCTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGAT 4185
Query 112379 CAAG 112382
||||
Sbjct 4186 CAAG 4189
>seq98
Length=574835
Score = 134 bits (148), Expect = 2e-26
Identities = 237/337 (70%), Gaps = 10/337 (3%)
Strand=Plus/Minus
Query 176723 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 176782
|||| || ||||||||||| || || || |||| ||| ||| | ||||||||||||
Sbjct 430541 TTGATGATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGC 430482
Query 176783 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 176842
|| || || ||| | || || || | || ||||| || ||||||||||||
Sbjct 430481 TTGCCGTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATC 430422
Query 176843 TTCTTGAGATCG-TTGAACTCTTGGT-TTGATGTG-AGCTGTGTGACAGAGGCATCACGA 176899
| ||||| ||| ||||| ||| || ||| | | || | || | | || |||||
Sbjct 430421 TGCTTGA--TCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGCCCGCCGCTTCACGC 430365
Query 176900 ACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAG 176959
|| || |||| || || | |||||||||||| |||| || ||||| || ||||
Sbjct 430364 ACGTTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCC 430305
Query 176960 AGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTG 177019
||||||| || ||||||| || || ||||| || || |||| |||||| || ||||||
Sbjct 430304 AGACCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTG 430245
Query 177020 --CCAGATTGTGCCGTACCCGCCTTGTTCGCATCATC 177054
|| | | | |||||| || ||||||||||| ||
Sbjct 430244 GACCCGTTCCT--CGTACCAGCGTTGTTCGCATCTTC 430210
>seq89
Length=1766943
Score = 120 bits (132), Expect = 4e-22
Identities = 269/396 (68%), Gaps = 6/396 (2%)
Strand=Plus/Plus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| |||||||| | || ||| ||| || |||| || || |||
Sbjct 83316 CCGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGCCGTCCAGATCCCTCAATC 83375
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| |||||| |||| || ||| ||||||||| | ||| | || ||
Sbjct 83376 CGAGACGACGCCCTTCCACCCTCGTTCGCCATACGGAGTCGCCAAGTTGTACGCCTTCTG 83435
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| || || ||||||||| | |||| ||| || ||| ||| ||| | |||||
Sbjct 83436 GATCGTCAAAAACTACCGCGAGGCGTACGATATGTACGCGTGCAACGGTATCTTGTTCAA 83495
Query 13772 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 13829
||| || || ||| | || ||| ||| |||||| || | |||||| | ||||| | ||
Sbjct 83496 CCACGAGTCCCCGCGTCGTGGTCGCAC-CTTTGTCACAAGGAAGATCTCCCGAGC-TGTC 83553
Query 13830 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 13889
| ||| | ||| || |||| | | | | | || || || | || || |
Sbjct 83554 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 83613
Query 13890 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 13949
|||||||| |||||| ||||| || || | ||||||| ||||| || ||||| ||
Sbjct 83614 GATTGGGGACACGCGTGCGACTACGTCGAGGGTATGTGGAGGATGCTGCAGCAAGAC-AA 83672
Query 13950 GCC-GACGAATATGTAGTAGCAACGGGTGAGACCCA 13984
||| ||||| | ||| | || ||||||||||||||
Sbjct 83673 GCCTGACGACTTTGTCCTCGCGACGGGTGAGACCCA 83708
>seq68
Length=952209
Score = 98.7 bits (108), Expect = 1e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 13592 CCGCATCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 13651
|||| |||| || ||||| | || ||| ||| || ||||| ||| | || ||
Sbjct 278748 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 278689
Query 13652 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 13711
|||| ||| ||||||||||| || ||| |||||||||| | ||| | || ||
Sbjct 278688 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 278629
Query 13712 GCTCGTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAA 13771
| |||| ||||| ||||||||||| |||| ||| || ||| ||| |||||||||||
Sbjct 278628 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 278569
Query 13772 CCATGAATCACC 13783
||| || || ||
Sbjct 278568 CCACGAGTCCCC 278557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741111959520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |