Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq79 168 8e-37 seq89 138 1e-27 seq68 107 2e-18 seq98 87.8 2e-12 >seq79 Length=767515 Score = 168 bits (186), Expect = 8e-37 Identities = 550/849 (65%), Gaps = 13/849 (2%) Strand=Plus/Minus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| || ||||| ||||| || || ||| ||| | | |||||| | || || Sbjct 4266 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4207 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||| || || ||| ||||| || | ||||||||||| || ||||| Sbjct 4206 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4147 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 || ||||||||||||||| |||| | || || || ||| | || ||||||||| | | Sbjct 4146 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4087 Query 106643 CACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701 || | | | || || || | | ||||| || |||||| ||||| || | | Sbjct 4086 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4028 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 | ||| | ||||| || || | ||| |||||| || || | | | || ||||| Sbjct 4027 CAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAA 3968 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 || | ||| | || | |||| || |||| |||||| || || |||||||| || | Sbjct 3967 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 3908 Query 106822 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 106881 |||||||||| | | || | || || | || ||||| || | || ||||| Sbjct 3907 CAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3848 Query 106882 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 106939 ||| | || || |||||||| ||||| || |||| |||| | ||| ||||| Sbjct 3847 CTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 3791 Query 106940 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 106995 ||| |||| | || |||||||| ||| || | || || ||||| || | || Sbjct 3790 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGAT 3731 Query 106996 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 107055 || | || | || || || || ||| || | || | | | ||||| Sbjct 3730 GCCGTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGAT 3671 Query 107056 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 107115 | || || ||||| || || ||| ||||| | || ||| | | || || | || Sbjct 3670 GCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTA 3611 Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175 ||| || | ||| || || ||||| | | || | ||| || || | |||||| Sbjct 3610 GATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTG 3551 Query 107176 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-TTGGGACATCT 107234 || || || || |||||||| || || | ||||| | || |||| | |||||| Sbjct 3550 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACATGA 3492 Query 107235 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCA 107294 || ||| | || |||||| || ||||| | |||||| ||||||| ||| ||||||| Sbjct 3491 GGTTGTACGACTGCAAGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCA 3432 Query 107295 TAAACATGT 107303 | | ||||| Sbjct 3431 TGAGCATGT 3423 >seq89 Length=1766943 Score = 138 bits (152), Expect = 1e-27 Identities = 273/396 (69%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958 |||| |||| |||||||| | || ||| ||| || |||| || || ||| Sbjct 83316 CCGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGCCGTCCAGATCCCTCAATC 83375 Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018 |||| ||| |||||| |||| || ||| ||||||||| | ||| | || || Sbjct 83376 CGAGACGACGCCCTTCCACCCTCGTTCGCCATACGGAGTCGCCAAGTTGTACGCCTTCTG 83435 Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078 | |||||||||| ||||||||| | |||| ||| |||||| ||| ||| | ||||| Sbjct 83436 GATCGTCAAAAACTACCGCGAGGCGTACGATATGTACGCGTGCAACGGTATCTTGTTCAA 83495 Query 7079 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTCACAAAGAAGAT-TACCGAGGGTATC 7136 ||| || || ||| | || ||| ||| ||||||||||| |||||| | |||| | | || Sbjct 83496 CCACGAGTCCCCGCGTCGTGGTCGCAC-CTTTGTCACAAGGAAGATCTCCCGA-GCTGTC 83553 Query 7137 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 7196 | ||| | ||| || |||| | | | | | || || || | || || | Sbjct 83554 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 83613 Query 7197 GATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATGCTTCAACAAGAGGAA 7256 |||||||| |||||| ||||| || || | |||||| ||||| || ||||| || Sbjct 83614 GATTGGGGACACGCGTGCGACTACGTCGAGGGTATGTGGAGGATGCTGCAGCAAGA-CAA 83672 Query 7257 GCC-GACGAATATGTAGTAGCAACGGGTGAGACCCA 7291 ||| ||||| | ||| | || |||||||||||||| Sbjct 83673 GCCTGACGACTTTGTCCTCGCGACGGGTGAGACCCA 83708 >seq68 Length=952209 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 6899 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 6958 |||| |||| || ||||| |||| ||| ||| || ||||| ||| | || || Sbjct 278748 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 278689 Query 6959 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 7018 |||| ||| ||||||||||| || ||| |||||||||| | ||| | || || Sbjct 278688 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 278629 Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078 | ||||||| || ||||||||||| |||| ||| |||||| ||| ||||||||||| Sbjct 278628 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 278569 Query 7079 CCATGAATCACC 7090 ||| || || || Sbjct 278568 CCACGAGTCCCC 278557 >seq98 Length=574835 Score = 87.8 bits (96), Expect = 2e-12 Identities = 228/341 (67%), Gaps = 14/341 (4%) Strand=Plus/Minus Query 169178 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 169237 ||| ||||||||||| || || ||||| | ||| ||| | ||| ||||| || || Sbjct 430536 GATCAGACCCTTGATATGCGATCCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCC 430477 Query 169238 ATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCCAAGATCTTCTT 169297 || || || || || ||| |||| || || || ||||||||||||| ||| Sbjct 430476 GTAACGGAGCGAGTCGACGTCGGTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTT 430417 Query 169298 GAGATCG-TTGAACTCTTGG----TTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACA 169352 ||||| ||||| ||| || | || | | ||| ||| | | || || || || Sbjct 430416 --GATCGCTTGAA-TCTCGGCATTGTCGAGGAGGGCTTTGC--CCGCCGCTTCACGCACG 430362 Query 169353 TTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGA 169412 || |||| || || | ||| ||||| ||||||| || || || ||||| | ||| Sbjct 430361 TTGAGCAACTTTCCTCGCAAAGGGAAGACACCATAGTTGTCTCGACCGACGACAGCCAGA 430302 Query 169413 CCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTT--TC 169470 |||| ||| || || | || || ||||| || || || | ||||| || ||||| | Sbjct 430301 CCCGAGACGGCGAGCGCCTTGGCGGAATCTCCTTCGGTCAAGATGAGCGTGCACTTGGAC 430242 Query 169471 CAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTG 169511 | | | | |||||| || ||||| || || || | |||| Sbjct 430241 CCG--TTCCTCGTACCAGCGTTGTTCGCATCTTCGAGCTTG 430203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979575789840