Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq85 82.4 9e-11 seq11 82.4 9e-11 >seq85 Length=75362 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 158986 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 159045 ||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||| ||| Sbjct 57896 CAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCAGGGGTTCGAATCCC 57955 Query 159046 GTCTG 159050 |||| Sbjct 57956 TTCTG 57960 >seq11 Length=15596 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 158986 CAGTAGCTCAGATGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCT 159045 ||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||| ||| Sbjct 1694 CAGTAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCAGGGGTTCGAATCCC 1635 Query 159046 GTCTG 159050 |||| Sbjct 1634 TTCTG 1630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557582843013200