Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq110 82.4 9e-11 seq75 82.4 9e-11 seq45 82.4 9e-11 >seq110 Length=50150 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| |||||||| ||| ||||||||||| |||||||||||| ||||||||||||| Sbjct 18366 TGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGAT 18425 Query 22535 TCTCCTATTCTCCAC 22549 ||||| |||||| Sbjct 18426 CCTCCTTGGCTCCAC 18440 >seq75 Length=349689 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| |||||||| ||| ||||||||||| |||||||||||| ||||||||||||| Sbjct 249340 TGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGAT 249399 Query 22535 TCTCCTATTCTCCAC 22549 ||||| |||||| Sbjct 249400 CCTCCTTGGCTCCAC 249414 >seq45 Length=67623 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| |||||||| ||| ||||||||||| |||||||||||| ||||||||||||| Sbjct 6491 TGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGAT 6432 Query 22535 TCTCCTATTCTCCAC 22549 ||||| |||||| Sbjct 6431 CCTCCTTGGCTCCAC 6417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560606836738400