Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq110 82.4 9e-11
seq75 82.4 9e-11
seq45 82.4 9e-11
>seq110
Length=50150
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534
||||| |||||||| ||| ||||||||||| |||||||||||| |||||||||||||
Sbjct 18366 TGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGAT 18425
Query 22535 TCTCCTATTCTCCAC 22549
||||| ||||||
Sbjct 18426 CCTCCTTGGCTCCAC 18440
>seq75
Length=349689
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534
||||| |||||||| ||| ||||||||||| |||||||||||| |||||||||||||
Sbjct 249340 TGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGAT 249399
Query 22535 TCTCCTATTCTCCAC 22549
||||| ||||||
Sbjct 249400 CCTCCTTGGCTCCAC 249414
>seq45
Length=67623
Score = 82.4 bits (90), Expect = 9e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534
||||| |||||||| ||| ||||||||||| |||||||||||| |||||||||||||
Sbjct 6491 TGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGGAGTTCGAT 6432
Query 22535 TCTCCTATTCTCCAC 22549
||||| ||||||
Sbjct 6431 CCTCCTTGGCTCCAC 6417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560606836738400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |