Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq150 87.8 3e-12
seq85 87.8 3e-12
seq45 87.8 3e-12
>seq150
Length=10434
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018
||| |||||||||||||| |||||||||||| ||||||||||| |||| || |||||
Sbjct 1064 TGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTC 1123
Query 133019 AAATCCCTCCCCCGCA 133034
|||||| ||||||||
Sbjct 1124 AAATCCTGCCCCCGCA 1139
>seq85
Length=75362
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018
||| |||||||||||||| |||||||||||| ||||||||||| |||| || |||||
Sbjct 2225 TGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTC 2166
Query 133019 AAATCCCTCCCCCGCA 133034
|||||| ||||||||
Sbjct 2165 AAATCCTGCCCCCGCA 2150
>seq45
Length=67623
Score = 87.8 bits (96), Expect = 3e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018
||| |||||||||||||| |||||||||||| ||||||||||| |||| || |||||
Sbjct 2600 TGACGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTC 2541
Query 133019 AAATCCCTCCCCCGCA 133034
|||||| ||||||||
Sbjct 2540 AAATCCTGCCCCCGCA 2525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895764541284720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |