Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq19 104 1e-17 >seq19 Length=19313 Score = 104 bits (114), Expect = 1e-17 Identities = 300/459 (65%), Gaps = 2/459 (0%) Strand=Plus/Plus Query 21993 TCGAAATATTTTCCGGAAGCATAATCCGATTTCTCGAATCCTTTAAATGTTTCACCTTTT 22052 |||||||| | ||| ||| || || ||||||||||| | ||| ||||| || || Sbjct 4230 TCGAAATAATGGCCGTTAGCGTATTCGGATTTCTCGAAGTCCGCAAACGTTTCGCCGGTT 4289 Query 22053 CTCAA-TGCTATTTCTGCGCTTGCTTCAATTGAGTAATAGTTCAACATCATGAAGAATGT 22111 |||| || || |||| ||| || || |||||||||| ||| ||||| | Sbjct 4290 -TCAACGGCGATCATCATGCTTTTTTCGATCGAATAATAGTTCATGGCCATAAAGAAGGC 4348 Query 22112 ACGAGCAAAGTCTTTCGCTTCTTCAGATTCATAAGCAATCAAGTTTTTAGATAAGTAGCC 22171 ||| || || |||||||| ||||| ||||||||| || ||| || | || ||||| Sbjct 4349 ACGTGCGAATTCTTTCGCGTCTTCGCTTTCATAAGCGATTTTGTTCTTCGCAAAATAGCC 4408 Query 22172 ATGTAAGTTCATAGCTCCTAATCCTACTGAATGTAATTCTTCATTTGCTTTTTTAACACC 22231 || | |||||| | || | ||| || ||||| | ||| || ||||| || || Sbjct 4409 GTGCAGGTTCATCACACCAAGTCCAACGGAATGCATTTCGCGGTTGGCTTTCGCCACGCC 4468 Query 22232 TGGGGCGTTTTGGATCACCGACATATCTGATACCGCAGTTAATGCGTACATTGCATTATG 22291 || || || | | | |||||| || | ||| || ||| ||| | | ||| Sbjct 4469 CGGCGCATTGCCTACGTCGGTCATATCGCTGACGGAAGTCAAAGCGGTCATGCCTTCATG 4528 Query 22292 GATAATCATACGTAGTCGCTTGTCTTCCATTACGTTTACGATGTTTAGTGAACCTAAGTT 22351 | | | || | ||| ||||| |||||||||||||| || ||| | | ||| Sbjct 4529 AACAGACTCGCGGATCTTCTTCGACTCCATCACGTTTACGATGTTCAGCGAAGCCAGGTT 4588 Query 22352 ACAGCTAATATCGTTACGAATAATGTCTTCTTCTCCATAATCCGTAATTGTTGATACTTC 22411 ||||| || ||| || || |||||| || ||||| ||||| || ||| Sbjct 4589 GCAGCTGATGTCGCGGCGGATCTGGTCTTCCATCCCGTAATCGTTAATTTCGGAAGTTTC 4648 Query 22412 GGATAGTTGGAAGATTTCTGTACAAAGATTAGACATTTT 22450 |||||||| || || || || || || |||||||| Sbjct 4649 CTGCAGTTGGAAAATCTCCGTGCACAGGTTGGACATTTT 4687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300159392738800