Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_019515.1
Length=93839
Score E
Sequences producing significant alignments: (Bits) Value
seq19 104 1e-17
>seq19
Length=19313
Score = 104 bits (114), Expect = 1e-17
Identities = 300/459 (65%), Gaps = 2/459 (0%)
Strand=Plus/Plus
Query 21993 TCGAAATATTTTCCGGAAGCATAATCCGATTTCTCGAATCCTTTAAATGTTTCACCTTTT 22052
|||||||| | ||| ||| || || ||||||||||| | ||| ||||| || ||
Sbjct 4230 TCGAAATAATGGCCGTTAGCGTATTCGGATTTCTCGAAGTCCGCAAACGTTTCGCCGGTT 4289
Query 22053 CTCAA-TGCTATTTCTGCGCTTGCTTCAATTGAGTAATAGTTCAACATCATGAAGAATGT 22111
|||| || || |||| ||| || || |||||||||| ||| ||||| |
Sbjct 4290 -TCAACGGCGATCATCATGCTTTTTTCGATCGAATAATAGTTCATGGCCATAAAGAAGGC 4348
Query 22112 ACGAGCAAAGTCTTTCGCTTCTTCAGATTCATAAGCAATCAAGTTTTTAGATAAGTAGCC 22171
||| || || |||||||| ||||| ||||||||| || ||| || | || |||||
Sbjct 4349 ACGTGCGAATTCTTTCGCGTCTTCGCTTTCATAAGCGATTTTGTTCTTCGCAAAATAGCC 4408
Query 22172 ATGTAAGTTCATAGCTCCTAATCCTACTGAATGTAATTCTTCATTTGCTTTTTTAACACC 22231
|| | |||||| | || | ||| || ||||| | ||| || ||||| || ||
Sbjct 4409 GTGCAGGTTCATCACACCAAGTCCAACGGAATGCATTTCGCGGTTGGCTTTCGCCACGCC 4468
Query 22232 TGGGGCGTTTTGGATCACCGACATATCTGATACCGCAGTTAATGCGTACATTGCATTATG 22291
|| || || | | | |||||| || | ||| || ||| ||| | | |||
Sbjct 4469 CGGCGCATTGCCTACGTCGGTCATATCGCTGACGGAAGTCAAAGCGGTCATGCCTTCATG 4528
Query 22292 GATAATCATACGTAGTCGCTTGTCTTCCATTACGTTTACGATGTTTAGTGAACCTAAGTT 22351
| | | || | ||| ||||| |||||||||||||| || ||| | | |||
Sbjct 4529 AACAGACTCGCGGATCTTCTTCGACTCCATCACGTTTACGATGTTCAGCGAAGCCAGGTT 4588
Query 22352 ACAGCTAATATCGTTACGAATAATGTCTTCTTCTCCATAATCCGTAATTGTTGATACTTC 22411
||||| || ||| || || |||||| || ||||| ||||| || |||
Sbjct 4589 GCAGCTGATGTCGCGGCGGATCTGGTCTTCCATCCCGTAATCGTTAATTTCGGAAGTTTC 4648
Query 22412 GGATAGTTGGAAGATTTCTGTACAAAGATTAGACATTTT 22450
|||||||| || || || || || || ||||||||
Sbjct 4649 CTGCAGTTGGAAAATCTCCGTGCACAGGTTGGACATTTT 4687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300159392738800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |