Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq53 127 3e-24 >seq53 Length=16508 Score = 127 bits (140), Expect = 3e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 123107 TTCCTAGGCGTACCGTTTAACATTGCCTCTTACGCGCTCCTGATACACATGTTTGCCCAG 123166 ||||| || | |||||||||||||| ||| ||||| ||| || ||| |||||||| Sbjct 11461 TTCCTTGGACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGCCCAG 11520 Query 123167 CAGGCCAATATGGCAGTAGGTGACTTCGTGTGGACGGGTGGGGATGTGCATCTGTACTCC 123226 ||| | || ||| ||| || || ||| | ||| | || || || |||||| | || ||| Sbjct 11521 CAGTGCGATCTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTCC 11580 Query 123227 AACCACCTGGAGCAGGCAGATTTGCAGTTAACTCGCGAACCTCATCCGTTACCACAACTG 123286 ||||| |||||||||| | ||||| | | |||||| ||||| | || || || Sbjct 11581 AACCATCTGGAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTTATCCGCTGCCGCAGCTT 11640 Query 123287 CGGATTAAACGTCGTCCGGATTCTATCTTCGACTATAAGTTTGAAGATTTCGA 123339 |||||||| |||||||| || || || || || ||||| |||||||| Sbjct 11641 GTTATTAAACGGAAGCCGGATTCCATTTTTGATTACAAATTTGAGGATTTCGA 11693 Score = 125 bits (138), Expect = 1e-23 Identities = 198/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCAGAC 122422 |||||| |||| |||| ||||||| || ||| || | || ||||||| ||| Sbjct 10951 ATGAAAGCATATTTGGATTTACTGCAAGATATTCTCGATCATGGTGTGGAAAAAGGGGAC 11010 Query 122423 CGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAA 122482 || || || || |||||| |||| |||| ||| || | |||||||| || || Sbjct 11011 CGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCGGAA 11070 Query 122483 GGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTG 122542 ||||| |||||||| || || ||| || || || ||| | | ||||| ||||| Sbjct 11071 GGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTTCTC 11130 Query 122543 TGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGG 122602 |||||||| | ||| ||||||||||| |||||| | || || || || ||| Sbjct 11131 TGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGGAGTTTCCATTTGG 11190 Query 122603 GATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGG 122646 ||||||||||| ||||| | ||| | || || ||||| ||||| Sbjct 11191 GATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGG 11234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777630386413600