Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq53 127 3e-24
>seq53
Length=16508
Score = 127 bits (140), Expect = 3e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 123107 TTCCTAGGCGTACCGTTTAACATTGCCTCTTACGCGCTCCTGATACACATGTTTGCCCAG 123166
||||| || | |||||||||||||| ||| ||||| ||| || ||| ||||||||
Sbjct 11461 TTCCTTGGACTGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGCCCAG 11520
Query 123167 CAGGCCAATATGGCAGTAGGTGACTTCGTGTGGACGGGTGGGGATGTGCATCTGTACTCC 123226
||| | || ||| ||| || || ||| | ||| | || || || |||||| | || |||
Sbjct 11521 CAGTGCGATCTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTCC 11580
Query 123227 AACCACCTGGAGCAGGCAGATTTGCAGTTAACTCGCGAACCTCATCCGTTACCACAACTG 123286
||||| |||||||||| | ||||| | | |||||| ||||| | || || ||
Sbjct 11581 AACCATCTGGAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTTATCCGCTGCCGCAGCTT 11640
Query 123287 CGGATTAAACGTCGTCCGGATTCTATCTTCGACTATAAGTTTGAAGATTTCGA 123339
|||||||| |||||||| || || || || || ||||| ||||||||
Sbjct 11641 GTTATTAAACGGAAGCCGGATTCCATTTTTGATTACAAATTTGAGGATTTCGA 11693
Score = 125 bits (138), Expect = 1e-23
Identities = 198/284 (70%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCAGAC 122422
|||||| |||| |||| ||||||| || ||| || | || ||||||| |||
Sbjct 10951 ATGAAAGCATATTTGGATTTACTGCAAGATATTCTCGATCATGGTGTGGAAAAAGGGGAC 11010
Query 122423 CGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAA 122482
|| || || || |||||| |||| |||| ||| || | |||||||| || ||
Sbjct 11011 CGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATCGGAA 11070
Query 122483 GGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTG 122542
||||| |||||||| || || ||| || || || ||| | | ||||| |||||
Sbjct 11071 GGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACTTCTC 11130
Query 122543 TGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGG 122602
|||||||| | ||| ||||||||||| |||||| | || || || || |||
Sbjct 11131 TGGTTCCTTAAGGGAGATACCAACATATCCTATCTGCATGAGAATGGAGTTTCCATTTGG 11190
Query 122603 GATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGG 122646
||||||||||| ||||| | ||| | || || ||||| |||||
Sbjct 11191 GATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGG 11234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777630386413600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |