Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq75 116 1e-20 seq70 100 8e-16 seq93 86.0 2e-11 >seq75 Length=349689 Score = 116 bits (128), Expect = 1e-20 Identities = 223/326 (68%), Gaps = 2/326 (1%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || ||||| |||||||| ||||| || || | ||| || | ||| | | ||| | | Sbjct 172787 CCTACAGCGTCAATTTCATCAATAAAGATAATACATGGGGCATTCTTCTTAGCATTCTCG 172728 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || || || | ||||||||||| || | || || ||||||| ||||| || ||| || Sbjct 172727 AACAAGTCGCGGACACGGGATGCACCCACGCCGACGAACATTTCCACAAAGTCGGAACCG 172668 Query 289150 GATACT-TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 || | |||| ||| | ||| |||||||||||||| || || || || |||||||| Sbjct 172667 GAAATGCTGAA-GAACGGTACGCCAGCTTCGCCTGCTACGGCTCTGGCAAGGAGTGTCTT 172609 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 ||||||||| || || || | | || || || || || | ||| || | | | Sbjct 172608 ACCTGTTCCCGGAGGACCTACAAGCAGTACCCCTTTCGGAATACGTGCTCCGACTGCCGA 172549 Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328 | || ||| ||| || |||||||||| ||| | ||||| | ||| | || || Sbjct 172548 GAACTTACGAGGATCCTTCAAGAATTCTACAACTTCGACGAGTTCCTGTTTCTCTTCGTC 172489 Query 289329 ACATCCTGCTACATCAGCAAAAGTAA 289354 || |||||||| ||||||||| Sbjct 172488 TGCCCCCGCTACATCTTCAAAAGTAA 172463 >seq70 Length=566626 Score = 100 bits (110), Expect = 8e-16 Identities = 128/172 (74%), Gaps = 12/172 (7%) Strand=Plus/Plus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 |||| || || ||||| ||||||||||||||||| |||||||||||||||||||| || | Sbjct 545414 CACCATGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACCACCATCACGCG 545473 Query 251546 CCCTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGGC 251599 | |||||| |||| || || || |||| | | | |||||| | | ||| | Sbjct 545474 ATCGACCCTCCACAGGTTGTCGGGTCAAGATCTGA--AGAGGACCGCGAGCTCGAGAGTG 545531 Query 251600 TATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651 || ||| || || ||||| ||||||||||| |||||| ||| ||||| Sbjct 545532 GATTTTG----TCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACC 545579 >seq93 Length=1183707 Score = 86.0 bits (94), Expect = 2e-11 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 302544 TACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAAT 302603 |||||| ||| || ||| ||| | ||||| | ||||| | |||||| || || Sbjct 326606 TACGGTGCCATCGTATGCAACCATGACATCTTCGAGCGCCTTGACGAGACGACGTTGGAT 326547 Query 302604 ATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGC 302663 || || || || || || || || ||||| || | || | || || |||| || Sbjct 326546 GTACCCCGTCTCAGCCGTCTTGACGGCCGTATCGATCAATCCTTCTCGTCCGGCCATGGC 326487 Query 302664 ATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCA 302721 |||||||| | ||||| |||| || | || | ||| | | || |||| |||||||| Sbjct 326486 GTGGAAGAAGAACTCTTGCGGT-GTCAAACCTCGCAAGTACG-AGTTCTCGACGAAACCC 326429 Query 302722 CGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCA 302761 | ||| |||||||||| ||| |||||||||||| |||| Sbjct 326428 CTCGCTTCGGGCGAATAATCGTCCTTGGTAAAGTGGGGCA 326389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814469627942