Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq53 127 3e-24 >seq53 Length=16508 Score = 127 bits (140), Expect = 3e-24 Identities = 176/242 (73%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCG-TTTCAACTTGCA 99010 ||||| || ||||||||||| | || | || |||| |||| | || ||| | || | Sbjct 11008 GACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATC- 11066 Query 99011 AGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACT 99070 |||||||| ||||||||||| || || || || ||| || || | |||||||| Sbjct 11067 GGAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACT 11126 Query 99071 GCTGTGGTTCCTGAAAGGCGACACCA--ATATCCAGTACCTGAAAGATAATGGTGTAACC 99128 || |||||||| || || || |||| |||||| || ||| | || ||||| || || Sbjct 11127 TCTCTGGTTCCTTAAGGGAGATACCAACATATCC--TATCTGCATGAGAATGGAGTTTCC 11184 Query 99129 ATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGG 99188 |||||||| ||||||||||| | || || || || || ||||| ||||| |||||| Sbjct 11185 ATTTGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGGCTCCCAGTGG 11244 Query 99189 CG 99190 || Sbjct 11245 CG 11246 Score = 114 bits (126), Expect = 2e-20 Identities = 190/272 (70%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 99634 TGCCGTTTAACATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAG-GCGAAT 99692 ||||||||||||| || ||||| || ||| || ||| |||| |||||| ||| || Sbjct 11471 TGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGCCCAGCAGTGCG-AT 11529 Query 99693 ATGGCGGTGGGCGATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTG 99752 ||| || || || ||| ||||| |||| || || |||||| | ||||| ||||||||| Sbjct 11530 CTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTCCAACCATCTG 11589 Query 99753 GAACAGGCACGTACTCAGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAA 99812 || |||| || ||||| | | || | || |||| |||| |||| ||| Sbjct 11590 GAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTTATCCGCTGCCGCAGCTTGTTATTAAA 11649 Query 99813 CGTAAGCCGGACTCTATCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGAC 99872 || |||||||| || || || || || || || || ||||| || | | ||| | Sbjct 11650 CGGAAGCCGGATTCCATTTTTGATTACAAATTTGAGGATTTCGAGTTTGTGAACTATCAG 11709 Query 99873 CCACACCCGGCTATTAAAGCACCGGTGGCGAT 99904 | || |||| |||||||| ||||| ||||| Sbjct 11710 CATCATCCGGGAATTAAAGCGCCGGTAGCGAT 11741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716635312978640