Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq53 127 3e-24
>seq53
Length=16508
Score = 127 bits (140), Expect = 3e-24
Identities = 176/242 (73%), Gaps = 6/242 (2%)
Strand=Plus/Plus
Query 98952 GACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCG-TTTCAACTTGCA 99010
||||| || ||||||||||| | || | || |||| |||| | || ||| | || |
Sbjct 11008 GACCGGACAGGTACAGGCACCTTGTCCGTATTTGGCCGCCAGCTTCGCTTTGATCTATC- 11066
Query 99011 AGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACT 99070
|||||||| ||||||||||| || || || || ||| || || | ||||||||
Sbjct 11067 GGAAGGTTTTCCGCTGGTAACAACAAAACGAGTACATCTGAAATCCGTTGTTCATGAACT 11126
Query 99071 GCTGTGGTTCCTGAAAGGCGACACCA--ATATCCAGTACCTGAAAGATAATGGTGTAACC 99128
|| |||||||| || || || |||| |||||| || ||| | || ||||| || ||
Sbjct 11127 TCTCTGGTTCCTTAAGGGAGATACCAACATATCC--TATCTGCATGAGAATGGAGTTTCC 11184
Query 99129 ATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGG 99188
|||||||| ||||||||||| | || || || || || ||||| ||||| ||||||
Sbjct 11185 ATTTGGGATGAATGGGCGGATGAGAACGGTGAGCTTGGACCGGTTTACGGCTCCCAGTGG 11244
Query 99189 CG 99190
||
Sbjct 11245 CG 11246
Score = 114 bits (126), Expect = 2e-20
Identities = 190/272 (70%), Gaps = 2/272 (1%)
Strand=Plus/Plus
Query 99634 TGCCGTTTAACATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAG-GCGAAT 99692
||||||||||||| || ||||| || ||| || ||| |||| |||||| ||| ||
Sbjct 11471 TGCCGTTTAACATTGCAAGTTATGCGCTTTTGACCCATATGATTGCCCAGCAGTGCG-AT 11529
Query 99693 ATGGCGGTGGGCGATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTG 99752
||| || || || ||| ||||| |||| || || |||||| | ||||| |||||||||
Sbjct 11530 CTGGAAGTCGGGGAGTTCATCTGGTCCGGAGGAGACGTGCATATCTATTCCAACCATCTG 11589
Query 99753 GAACAGGCACGTACTCAGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAA 99812
|| |||| || ||||| | | || | || |||| |||| |||| |||
Sbjct 11590 GAGCAGGTTAAGACCCAGTTGGCCAGAGAACCTTATCCGCTGCCGCAGCTTGTTATTAAA 11649
Query 99813 CGTAAGCCGGACTCTATCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGAC 99872
|| |||||||| || || || || || || || || ||||| || | | ||| |
Sbjct 11650 CGGAAGCCGGATTCCATTTTTGATTACAAATTTGAGGATTTCGAGTTTGTGAACTATCAG 11709
Query 99873 CCACACCCGGCTATTAAAGCACCGGTGGCGAT 99904
| || |||| |||||||| ||||| |||||
Sbjct 11710 CATCATCCGGGAATTAAAGCGCCGGTAGCGAT 11741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716635312978640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |