Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_021558.1
Length=37644
Score E
Sequences producing significant alignments: (Bits) Value
seq75 158 3e-34
>seq75
Length=349689
Score = 158 bits (174), Expect = 3e-34
Identities = 231/326 (71%), Gaps = 3/326 (1%)
Strand=Plus/Minus
Query 23252 AAAGGAGGAATCACATTGCTGAATCGTACAATTCTTATCGGGCGTTTAACCCGCGATCCA 23311
|||||||| | | || |||| ||| ||| | ||||| || | ||||| |||||
Sbjct 78249 AAAGGAGGGACCTGGATGTTGAACCGTGTCATTTTGATCGGCCGGCTTACCCGGGATCCG 78190
Query 23312 GAATTGAAATATACACCTTCCGGGGTGGCTGTCACCGTCTTTACACTTGCTGTAGATAGA 23371
|| || ||||| || ||||| || || || || ||||| | || || || |||
Sbjct 78189 GAGCTGCGTTATACGCCATCCGGCGTTGCGGTAACTCAGTTTACTATCGCAGTGGACAGA 78130
Query 23372 CCTTTTACAAATAA---CGGAGAGCGTGAAGCGGATTTTATTCCCATCGTTGTTTGGAGA 23428
|||||||| | |||||| | ||||||||||| || || |||| ||||||
Sbjct 78129 CCTTTTACGTCGCAAGGCGGAGAAAGAGAAGCGGATTTCATACCGGTCGTAACGTGGAGA 78070
Query 23429 CAACTCGCAGAGACGTGCGCCACATATTTACGGAAAGGCCGCCTAACTGCTGTAGAAGGA 23488
|| || || || || || || | || | || ||||| || || ||||||||||||||
Sbjct 78069 CAGCTTGCTGAAACTTGTGCGAACTACCTGCGCAAAGGGCGTCTGACTGCTGTAGAAGGG 78010
Query 23489 CGAATTCAAACTCGTAACTATGAAAATAACGAAGGGCGAAGAATTTACGTGACAGAAGTT 23548
|| |||||| ||||||||||| ||||||||||| | | ||||||| || ||||||
Sbjct 78009 CGCATTCAAGTACGTAACTATGAGAATAACGAAGGTAAACGTGTTTACGTCACTGAAGTT 77950
Query 23549 GTAGCAGATAACGTCCGATTCTTGGA 23574
| || ||||| || || ||||||||
Sbjct 77949 ATTGCTGATAATGTTCGTTTCTTGGA 77924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120338962781352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |