Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_021558.1 Length=37644 Score E Sequences producing significant alignments: (Bits) Value seq75 158 3e-34 >seq75 Length=349689 Score = 158 bits (174), Expect = 3e-34 Identities = 231/326 (71%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 23252 AAAGGAGGAATCACATTGCTGAATCGTACAATTCTTATCGGGCGTTTAACCCGCGATCCA 23311 |||||||| | | || |||| ||| ||| | ||||| || | ||||| ||||| Sbjct 78249 AAAGGAGGGACCTGGATGTTGAACCGTGTCATTTTGATCGGCCGGCTTACCCGGGATCCG 78190 Query 23312 GAATTGAAATATACACCTTCCGGGGTGGCTGTCACCGTCTTTACACTTGCTGTAGATAGA 23371 || || ||||| || ||||| || || || || ||||| | || || || ||| Sbjct 78189 GAGCTGCGTTATACGCCATCCGGCGTTGCGGTAACTCAGTTTACTATCGCAGTGGACAGA 78130 Query 23372 CCTTTTACAAATAA---CGGAGAGCGTGAAGCGGATTTTATTCCCATCGTTGTTTGGAGA 23428 |||||||| | |||||| | ||||||||||| || || |||| |||||| Sbjct 78129 CCTTTTACGTCGCAAGGCGGAGAAAGAGAAGCGGATTTCATACCGGTCGTAACGTGGAGA 78070 Query 23429 CAACTCGCAGAGACGTGCGCCACATATTTACGGAAAGGCCGCCTAACTGCTGTAGAAGGA 23488 || || || || || || || | || | || ||||| || || |||||||||||||| Sbjct 78069 CAGCTTGCTGAAACTTGTGCGAACTACCTGCGCAAAGGGCGTCTGACTGCTGTAGAAGGG 78010 Query 23489 CGAATTCAAACTCGTAACTATGAAAATAACGAAGGGCGAAGAATTTACGTGACAGAAGTT 23548 || |||||| ||||||||||| ||||||||||| | | ||||||| || |||||| Sbjct 78009 CGCATTCAAGTACGTAACTATGAGAATAACGAAGGTAAACGTGTTTACGTCACTGAAGTT 77950 Query 23549 GTAGCAGATAACGTCCGATTCTTGGA 23574 | || ||||| || || |||||||| Sbjct 77949 ATTGCTGATAATGTTCGTTTCTTGGA 77924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120338962781352