Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq79 226 3e-53
seq114 105 8e-17
seq68 102 1e-15
seq136 100 3e-15
seq100 93.3 5e-13
>seq79
Length=767515
Score = 226 bits (250), Expect = 3e-53
Identities = 335/471 (71%), Gaps = 19/471 (4%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||||||||| |||| || |||| ||||||||||| |||| |||||| ||
Sbjct 3780 TGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAG 3721
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||| ||||| || | ||||| ||||| ||||| | ||||| | || |||
Sbjct 3720 TAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCG 3661
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | |||||||||||| |||||| |||||||||||||||||||| |||
Sbjct 3660 ATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCG 3601
Query 1630246 ATCGAGTCGGCCTTCAT-GTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||||| || ||||||| || | ||||| |||||||| |||||||| | ||| ||
Sbjct 3600 ATCGAATCATCCTTCATCGTGACCAAGAAA-CACGACGAAAGCTGCGGGTGAGGCGTTCC 3542
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA-GG 1630363
||||||||||||||| |||| || ||| || || || |||||| || ||| |
Sbjct 3541 GGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGA 3482
Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423
|| || |||||| || | |||| ||| | ||||| |||||
Sbjct 3481 CTGCAAG-ACGCGC------------TCGATGTCG---TGCCCGTGAATGCCGACGGCGA 3438
Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGG 1630483
| ||||||||||||| ||| || || ||| |||| |||| | || |||||
Sbjct 3437 CACGCATGAGCATGTGCTGCGGGCGTTCGGCGACCTTGCCGTCAATGCGAAGCAAGTAGG 3378
Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGT 1630534
| || | || ||| |||||||||| || | |||||||||||||
Sbjct 3377 AGCGCTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGT 3327
Score = 143 bits (158), Expect = 3e-28
Identities = 298/450 (66%), Gaps = 2/450 (0%)
Strand=Plus/Minus
Query 1628152 GGCGACGAAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTC 1628211
|||| ||| ||| || |||||||||||||| || | |||| | |||| || ||||||
Sbjct 4230 GGCGCCGAGTACTCGATGATCTCGGTGCACAAATTCGACGACTTGATCGTGCCAAGGTTC 4171
Query 1628212 TGCTGGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCG 1628271
| ||||| | || ||| |||||||||||| ||||||| |||| ||| || |||
Sbjct 4170 TTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCG 4111
Query 1628272 ATCTGCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGCG 1628330
| ||| ||| ||| || || |||| | || ||||||| | || | || |||||
Sbjct 4110 ACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGCGCGGGGATCGTCT-TCTTGGCGCG 4052
Query 1628331 GCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAG 1628390
|||| | || | |||| ||| ||||| ||
Sbjct 4051 ACCCTCCTTTTCGTATTTCTCGAACAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAG 3992
Query 1628391 GCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCAT 1628450
||||| || |||| || || ||||| | ||||||||| ||| | | | || |||
Sbjct 3991 ACCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCAT 3932
Query 1628451 AAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCC 1628510
||||| || |||| || || ||||||| || || || ||| |||||||||||
Sbjct 3931 GAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCC 3872
Query 1628511 GTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCA 1628570
||||||||| ||||| || | |||| | ||| |||||||||||||| ||||||
Sbjct 3871 GTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGAT 3812
Query 1628571 GGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
|| ||||| || |||||| ||| ||
Sbjct 3811 CGCGAAGGCTCCGGGACGCTTGTTGCCACC 3782
Score = 116 bits (128), Expect = 5e-20
Identities = 174/242 (72%), Gaps = 4/242 (2%)
Strand=Plus/Minus
Query 1626982 TGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCG 1627041
||||||||||| |||| ||| || || |||||| | ||||||| |||||||| ||
Sbjct 5380 TGGTCGACGGTGAACTTGATTGCACCGACGGCGGCGCGCGTGCGCAAGTAGTACATACCC 5321
Query 1627042 GTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG 1627101
||||| || || || ||| ||||| |||||||||||||| || | ||||| |
Sbjct 5320 GTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTGCATCGACGTGAGCTGCGCCATCGTCGGG 5261
Query 1627102 -TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGC 1627160
||| | ||| | ||||||||| || |||||| | ||| | ||||||||||
Sbjct 5260 CTCGAC-AAGTGGATGTTGAGCGATTGCGACTGGTCAATGAAGGCACCTCGATCGGCCGA 5202
Query 1627161 CATGTCGATGGTGACCCGGTTG-GGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219
|| ||||| | | | ||| | | |||||| ||||||||| ||||||||||||| |
Sbjct 5201 CAGATCGATAAT-AGTCTTTTGCGAGAGCTCCCAGACGGTCTTGTAGATGGCCTTGAGAT 5143
Query 1627220 CG 1627221
||
Sbjct 5142 CG 5141
>seq114
Length=793728
Score = 105 bits (116), Expect = 8e-17
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
||||| |||||||| |||||||| ||||||| ||| || ||||| ||||| |||
Sbjct 310904 ATCGGTGGCACGGTCACGTGCGTCATCCGCAACGCTCCGTTCGGTCTCGGAGAGCCCGTG 310845
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| |||||| | || ||| | ||||||||||||||||||||||| || ||||||||
Sbjct 310844 -TTCGACAAGCTGGAAGCCCTTTTGGCCCACGCCATGCTGTCGATCCCCGCAACCAAGGG 310786
Query 19172 ATTCGAGATTGG 19183
|| ||||||||
Sbjct 310785 CTTTGAGATTGG 310774
Score = 96.9 bits (106), Expect = 4e-14
Identities = 155/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 1574008 TCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCG 1574067
|||||||||| ||||| ||||||| |||| |||| | || || || || |
Sbjct 404745 TCGACGTCGTACGCAACCGCATCAAGGCTTTCGCCCAGAAGAAGGTCACACTCCCACCGG 404804
Query 1574068 GACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGG 1574127
| ||||||||| | ||||||||||||| ||||||| | || ||| |||||||| |
Sbjct 404805 GTCGCCACAAGCTCGTCATCCTCGACGAAGCCGACTCGATGACCCCGGGAGCCCAGCAAG 404864
Query 1574128 CCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACA 1574187
| || || || ||||||| | ||||||| || ||||| ||| | |||||||||
Sbjct 404865 CGCTCCGCAGGACGATGGAAATCTTCTCCAACACCACTCGCTTCGCCTTTGCGTGCAACC 404924
Query 1574188 CGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCAT 1574230
| | | |||| ||| | | || ||||| ||||||||
Sbjct 404925 AGAGCAACAAGATCATTGAGCCGATTCAGAGTCGATGCGCCAT 404967
>seq68
Length=952209
Score = 102 bits (112), Expect = 1e-15
Identities = 126/172 (73%), Gaps = 3/172 (2%)
Strand=Plus/Minus
Query 869704 GAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGAC 869763
||| || || ||| ||||||| |||||||||||| |||||||||||| || |||||
Sbjct 96310 GAATCGCTCGACCAAGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGAC 96251
Query 869764 GTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGC 869820
|||| ||| |||| |||||||||| ||||| |||||| | ||||
Sbjct 96250 GTGCGAGATGAAGTAGCGCTCGTCGGGCTTGAGCTTGTTGTCCCAGTCGTGCATGTCCTT 96191
Query 869821 GCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872
| | ||||| ||| ||||||||||| | || ||||||||||| ||||||
Sbjct 96190 GGACAAGTCCATCTCTTCGGCGGTCCAAAAGGATGCCTCGGCCTTCTTGTAC 96139
>seq136
Length=578008
Score = 100 bits (110), Expect = 3e-15
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| ||| || ||| | | ||||| || || | ||||||||||||||||| ||
Sbjct 36894 GCTTGGACAGCTCTCCGGGGAGGATCAATCGGACCGAGGTCTGGATCTCGCGCGACGAGA 36835
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || | || ||| | | ||| || | || ||| | ||||||| |||| |
Sbjct 36834 TGGTCAATCTCTGGTTGTATTTCGCGAGTTTGGACGCTTCGAGGGCGATGCGCTCGAAGA 36775
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| |||||||| | || | ||||| |||||| || || || ||||||||
Sbjct 36774 TGTCGTTGACGAACGAGTTGAGGATCAGCATCGCCTTGTTCGAAATACCGGTGTCGGGGT 36715
Query 1254523 GCACCTGCTTGAGCACCTTG 1254542
| || ||||| | |||||||
Sbjct 36714 GGACTTGCTTCAACACCTTG 36695
>seq100
Length=1345518
Score = 93.3 bits (102), Expect = 5e-13
Identities = 144/203 (71%), Gaps = 6/203 (3%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || ||| || | | ||||| ||| || | |||||||||||||||| ||
Sbjct 305470 GCTTGGACAATTCTCCAGGGAGGATCAAGCGAACCGAAGTCTGGATCTCGCGCGACGTGA 305411
Query 1254403 TCGTGTTGCGCTTGTTCGAGT---GCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
|||| || |||||| || |||| || | |||||| || |||||| || |
Sbjct 305410 TCGTC--GC-CTTGTTATTGTATAGCGCGAGCTTGGACGCCTCGATGGAGATGCGCTCAA 305354
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
||||||||||| |||||||| | || ||||| |||||| ||||| ||| |||||
Sbjct 305353 AGATGTCGTTGACGAACGAGTTGAGGATGAGCATCGCCTTGTTCGAGATACCCGTGTCGG 305294
Query 1254520 GGTGCACCTGCTTGAGCACCTTG 1254542
|||| || ||| | | ||| |||
Sbjct 305293 GGTGAACTTGCCTCAACACTTTG 305271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107125577262622
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