Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq54 118 9e-22
seq101 91.5 1e-13
>seq54
Length=1647379
Score = 118 bits (130), Expect = 9e-22
Identities = 279/408 (68%), Gaps = 15/408 (4%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261
|| ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | |
Sbjct 379274 GGGGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 379331
Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319
||||| || |||||| | || || ||| ||| | || | || |||||||||
Sbjct 379332 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGCTC 379386
Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379
|| || ||||| | || || |||| ||| |||||| |||||| | || ||||
Sbjct 379387 CGTTTCGGGGTTCTTGCACGACGCGCACAGCACGAACTTGTCGATGAAGACGTCGAGCAA 379446
Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439
||| | | | | ||||| | ||| ||||||||| | |||||| | | | |
Sbjct 379447 GTCACGCAGACGATTTGTCTCGTGCGCGCCATTGACGATGTAGCGTTCGGTCTCATCGTT 379506
Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499
|| || || ||||| || |||||||| ||| |||| |||||||| | ||| ||
Sbjct 379507 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCG 379566
Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558
| |||| || |||| || | ||||||| | ||||||||||||||||||||
Sbjct 379567 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTCTTGATGCCGTTGCCAC 379625
Query 34559 TTCCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605
|| |||| ||||| ||| ||| ||||| |||||||||||||||
Sbjct 379626 GGCCCTCGATCTTGG-TCAGGAGCGAGGGCATCTTGTAGCGGTAGAAC 379672
>seq101
Length=1000389
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326
|||| | ||||||| |||||||| || | || ||||| ||||| ||| |||| |||
Sbjct 688587 TTTACAGTGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAG 688528
Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386
| ||| || ||| | | || || ||||| ||||| |||||| | ||
Sbjct 688527 TCGTCCGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCA 688468
Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446
|| || ||| | || || | || || || ||||| ||||||| | | || | || |||
Sbjct 688467 GACCAGCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGAT 688408
Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||||||||||| || || || | ||| ||||| | | ||||| || ||
Sbjct 688407 TACAACATTCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 688355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840764769838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |