Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq54 118 9e-22 seq101 91.5 1e-13 >seq54 Length=1647379 Score = 118 bits (130), Expect = 9e-22 Identities = 279/408 (68%), Gaps = 15/408 (4%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAG-CGT-GCCGTGAT 34261 || ||||| || || |||||||| |||| || || | | | ||| | ||| |||| | | Sbjct 379274 GGGGGGTTCTTAAGGATGAAGGTCGTGAGTTTGTG-GCGCA-TGTCGACGTTGCCGCGCT 379331 Query 34262 AACCGCATGCTTTGCAGCCCTGACAGATAATG--TTCTTTTTAGCGGACACGATGAGCTC 34319 ||||| || |||||| | || || ||| ||| | || | || ||||||||| Sbjct 379332 TGCCGCAGGCCTTGCAGTC---ACGGAGGATGAATTCGTCTTTGGTGAT--GATGAGCTC 379386 Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 || || ||||| | || || |||| ||| |||||| |||||| | || |||| Sbjct 379387 CGTTTCGGGGTTCTTGCACGACGCGCACAGCACGAACTTGTCGATGAAGACGTCGAGCAA 379446 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 ||| | | | | ||||| | ||| ||||||||| | |||||| | | | | Sbjct 379447 GTCACGCAGACGATTTGTCTCGTGCGCGCCATTGACGATGTAGCGTTCGGTCTCATCGTT 379506 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499 || || || ||||| || |||||||| ||| |||| |||||||| | ||| || Sbjct 379507 GAAGGTCGCCTGGGCGCCGAGTTCGCACCCAAAGAACTTGGTCGGGTACGACGACGGGCG 379566 Query 34500 -TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCT 34558 | |||| || |||| || | ||||||| | |||||||||||||||||||| Sbjct 379567 ATTCAAG-GCTCGCGCGACATCAGCCATGTTGGGAAACACAGTCTTGATGCCGTTGCCAC 379625 Query 34559 TTCCTTCGACCTTGGCGCAGATGCG-CGGCATTTTGTAGCGGTAGAAC 34605 || |||| ||||| ||| ||| ||||| ||||||||||||||| Sbjct 379626 GGCCCTCGATCTTGG-TCAGGAGCGAGGGCATCTTGTAGCGGTAGAAC 379672 >seq101 Length=1000389 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 110267 TTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG 110326 |||| | ||||||| |||||||| || | || ||||| ||||| ||| |||| ||| Sbjct 688587 TTTACAGTGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAG 688528 Query 110327 CCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 | ||| || ||| | | || || ||||| ||||| |||||| | || Sbjct 688527 TCGTCCGACACGATCGACAACGTCAAGACCAAGATCCAAGACAAGGAAGGCATCCCGCCA 688468 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 || || ||| | || || | || || || ||||| ||||||| | | || | || ||| Sbjct 688467 GACCAGCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCGCCGAT 688408 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||||| || || || | ||| ||||| | | ||||| || || Sbjct 688407 TACAACATTCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 688355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840764769838