Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq150 89.7 8e-13 seq45 89.7 8e-13 seq75 84.2 4e-11 >seq150 Length=10434 Score = 89.7 bits (98), Expect = 8e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 120227 TGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGAT 120286 ||||| | ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 1356 TGCCGTTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAG 1415 Query 120287 CCCTGATGCCGGCACCATATTCTCTGGAG 120315 ||| | ||||||||| | || ||||| Sbjct 1416 TCCTCTCGACGGCACCATTTACTGTGGAG 1444 >seq45 Length=67623 Score = 89.7 bits (98), Expect = 8e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 120227 TGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGAT 120286 ||||| | ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 2308 TGCCGTTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAG 2249 Query 120287 CCCTGATGCCGGCACCATATTCTCTGGAG 120315 ||| | ||||||||| | || ||||| Sbjct 2248 TCCTCTCGACGGCACCATTTACTGTGGAG 2220 >seq75 Length=349689 Score = 84.2 bits (92), Expect = 4e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 120227 TGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGAT 120286 ||||| | ||||||| |||||||||||||||||||||||||||||||| |||||| | Sbjct 253488 TGCCGTTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAG 253547 Query 120287 CCCTGATGCCGGCACCATATTCTCTGGAG 120315 ||| | ||||||||| | | ||||| Sbjct 253548 TCCTCTCGACGGCACCATTTATTGTGGAG 253576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825915086222640