Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq126 98.7 5e-16 >seq126 Length=40741 Score = 98.7 bits (108), Expect = 5e-16 Identities = 421/661 (64%), Gaps = 11/661 (2%) Strand=Plus/Plus Query 66079 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 66138 ||||| || |||||| || || | ||| | || || || |||| || || | | Sbjct 13999 GTGGAAATCGTTCCCAGTGGTTCCTTGGCTTTAGATATTGCACTCGGCACAGGCGGATTC 14058 Query 66139 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66198 || | ||||| | | || ||||||| || ||||| || || || | || | | Sbjct 14059 CCTCGCGGCCGTATTATTGAGGTCTACGGACCGGAATCCTCCGGTAAAACTACGGTAGCT 14118 Query 66199 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66258 || || || | || | | || ||| || || | || || | |||||||| ||| Sbjct 14119 CTTCATGCTATTGCAGAAGTACAAAAGATTGGCGGACAAGCTGCTTTTATCGACGCGGAG 14178 Query 66259 CACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66318 || | || ||||| || ||||| ||||| || | |||| | | || || Sbjct 14179 CATGCGCTTGACCCGTCTTATGCCAATAAACTCGGCGTAAATATCGATGAATTGCTGCTG 14238 Query 66319 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66378 ||||| || || ||||||||||| ||||||||| || | | || |||| Sbjct 14239 TCCCAGCCTGATACAGGCGAGCAGGCATTGGAGATCGCCGAAGCCTTGGTGCGCAGTGGC 14298 Query 66379 GAGCTGTCCATCGTC--GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66436 | |||| || | || ||||||| || ||||| ||||| || || || | | Sbjct 14299 G--CTGTAGATATTATTGTTATTGACTCCGTTGCGGCACTGGTACCTAAAGCGGAAATTG 14356 Query 66437 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGC 66496 |||| || || || ||| ||| || || || || ||| | || ||||||||||| ||| Sbjct 14357 AAGGTGAAATGGGAGACTCTCATGTGGGTCTTCAAGCGAGACTGATGTCGCAGGCACTGC 14416 Query 66497 GCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGC 66556 | || | ||||| | ||| || | || ||| | | ||| | |||||| ||| Sbjct 14417 GTAAATTGTCCGGCGCAATCAGCAAATCGAAGACGATTGCTATCTTCATTAACCAGCTGC 14476 Query 66557 GCGAGAAGAT--CGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGC 66614 | |||||| | || | || | || |||| || || || |||||||| || Sbjct 14477 GTGAGAAGGTTGGGGTTATGTTTGGTA--ACCCG---GAAACTACGCCGGGCGGACGCGC 14531 Query 66615 TTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGG 66674 ||||| |||||| | | || || |||| || || || ||| ||| || || Sbjct 14532 TTTGAAATTCTACTCGACCGTACGTCTGGACGTACGCCGTGTCGAAACCATTAAAATGGG 14591 Query 66675 CGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCC 66734 | || || || |||||||||||||| |||||||| ||||| || |||| || || Sbjct 14592 TAACGATATGGTGGGTAACCGCACCCGGGTTAAAGTCGTGAAGAATAAAGTGGCTCCTCC 14651 Query 66735 G 66735 | Sbjct 14652 G 14652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242735508914730