Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq85 232 2e-55 seq19 199 1e-45 seq150 89.7 2e-12 seq75 89.7 2e-12 seq45 89.7 2e-12 >seq85 Length=75362 Score = 232 bits (256), Expect = 2e-55 Identities = 545/817 (67%), Gaps = 18/817 (2%) Strand=Plus/Minus Query 188777 TTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATG 188836 |||| ||||| ||||| |||||||| | || || |||||| ||||| | || | ||| Sbjct 54072 TTGGACCTACAGGTTCCGGTAAAACGCTGTTAGCCCAAACAATGGCTAAAATTCTGAATG 54013 Query 188837 TACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATG 188896 | || | || || | || |||||||| | || ||||| ||||||||||| ||||| | Sbjct 54012 TTCCGTTTGCGATTGCAGACGCAACTTCCCTGACCGAAGCCGGTTATGTAGGGGAAGACG 53953 Query 188897 TGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAAC 188956 | || ||| | ||||| | || || || || ||||| ||| | || |||||||| Sbjct 53952 TTGAGAACATCCTGCTTAAGCTGATTCAGGCTGCGGATTATGATGTTGAGAAAGCGGAAC 53893 Query 188957 GTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCA 189016 | || ||| | ||||| || ||| | |||||| |||| | || || || | | || | Sbjct 53892 GCGGTATTATCTATATTGACGAAATTGATAAAGTTGCCCGCAAGTCGGAGAATCCGTCTA 53833 Query 189017 TTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTA 189076 ||||||| || ||||| |||||||| || ||||| ||||| | ||||| ||||||||| Sbjct 53832 TTACCCGTGACGTATCCGGCGAAGGTGTGCAGCAGGCTTTGCTGAAAATTCTTGAAGGTA 53773 Query 189077 CAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAA 189136 | || || ||||| || ||||| || || ||||||||||| |||||| | | ||| Sbjct 53772 CGGTAGCTTCCGTTCCACCGCAAGGAGGACGCAAACACCCTCATCAAGAATTTATCCAAA 53713 Query 189137 TAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTA 189196 | ||||| || || || ||||| || || || || ||||| || | || | || | Sbjct 53712 TTGATACGACCAACATTTTGTTCATCTGCGGCGGTGCTTTTGACGGCATCGAGCAAATGA 53653 Query 189197 TCAAGAGACG----CGCTACAAAATCAACTTTAGGTTTTGATGATAGTGTAGATAAAGTA 189252 |||| | || || | || ||| | || ||| | | | ||| | Sbjct 53652 TCAAACGCCGTGTCGGCAAGAAGGTCA----TCGGCTTTAACGCAGCTTCCGAT---GGT 53600 Query 189253 CAAGAAGAA-ATCAAGGATGACAATAAAGTATTCCAACATCTTCAACCGCAAGATATTGT 189311 || ||||| | || | | |||| | || | | ||| ||| ||||| | | Sbjct 53599 CAGAAAGAACTTAAACCAGGTGAATA----CCTGCAGCTTGTTCTACCTGAAGATCTGCT 53544 Query 189312 TAAGTATGGTTTAATTCCAGAATTTATTGGGCGTGTACCAGTAATCGCAACTCTTAACAA 189371 ||||| |||| | ||||| || ||| | || ||| | ||||| ||| | || | | Sbjct 53543 TAAGTTTGGTCTGATTCCGGAGTTTGTCGGCCGTCTTCCAGTCATCTCTTCTTTGGAGCC 53484 Query 189372 ACTTGATCGAGATG-CATTGATTAACATTTTAACTGAGCCGCAAAACGCTATCATTAAAC 189430 || ||| |||| | | | | ||| || | ||||| | |||||| | | || | Sbjct 53483 GCTGGAT-GAGAAGACGCTTGTCCGCATCTTGGCGGAGCCTAAGAACGCTCTTGTGAAGC 53425 Query 189431 AATATCAGAAATTGTTAGATATGGATGGCGTGGAATTAGAATTCCAAAAAGAAGCATTAG 189490 | ||||| || ||| | || ||||| ||| | | |||||| || |||| | | Sbjct 53424 AGTATCAAAAGTTGCTTGAGCTGGATAATGTGCAGCTTGAATTCGAACCGAAAGCGCTCG 53365 Query 189491 AATCAATTGCAGATGAAGCGATTGAACGTAATACTGGTGCTCGCGGATTACAATCCATTA 189550 | | || || |||||||||| |||| || || ||||| ||||| | | |||| | Sbjct 53364 AGGCGATCGCCCGTGAAGCGATTAAACGCAACACCGGTGCCCGCGGCCTGCGCGCCATCA 53305 Query 189551 TTGAAAATATTATGTTAGATGTAATGTATGAAGTTCC 189587 | |||| |||||| | || || ||||| || ||||| Sbjct 53304 TCGAAAGCATTATGCTTGAAGTGATGTACGAGGTTCC 53268 Score = 91.5 bits (100), Expect = 5e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 58666 CCGTGGTGTAGCGGT-TAACACGCCTGCCTGTCACGTAGGAGATCGCCGGTTCGAATCCG 58724 ||||||||||| || ||||| |||||||||||||| |||||||||| ||||||||||| Sbjct 2105 CCGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAATCCC 2046 Query 58725 GTCGGGGCCGCCATT 58739 ||||| |||||||| Sbjct 2045 GTCGGTTCCGCCATT 2031 >seq19 Length=19313 Score = 199 bits (220), Expect = 1e-45 Identities = 1172/1862 (63%), Gaps = 21/1862 (1%) Strand=Plus/Minus Query 53967 TATAACTTTAAATTCCAATCATATATGGCGATTTCAAAGTTTTATAAAGATTATGCTTTA 54026 || ||||| | ||||| || || |||||| ||| |||||||||| |||||||| || Sbjct 5560 TACAACTTCCAGTTCCAGTCCTACATGGCGGCTTCGAAGTTTTATACCGATTATGCGGTA 5501 Query 54027 AAAACAAACGA----TAAAAAATTCTACTTAGAATCTTATGAAGATCGTATTGCTATTGT 54082 ||||||||||| | || ||| || || ||| |||||| | || | || Sbjct 5500 AAAACAAACGACCGCTCCAAGTATCTGG--AGCAT--TATCCGGATCGTGTGGCGGTAGT 5445 Query 54083 TTCTTTAT-TCTTAGGACAAGGTAATTTCAATAAAGCAAAAAGTTTAGCTGTTTCTATGA 54141 | | | |||| |||| || || | | | ||| | | || ||| |||| Sbjct 5444 TGCGCTCCATCTT-GGACGCGGCAACGCCGAAACAGCCTGCACGCTGGCACATTCGATGA 5386 Query 54142 TTGAACAAAGATACCAACCAGCTACTCCAACTTTCCTAAATGCTGGTAGAAGCAGACGCG 54201 | || || | || || || || || || ||||| || || || | |||| | |||| Sbjct 5385 TGGAGCAGCGCCTGCAGCCGGCGACCCCGACGTTCCTGAACGCGGGCAAAAGCCGCCGCG 5326 Query 54202 GAGAAATGGTTTCTTGTTTCTTATTAGAAATGGATGATAGCTTGAATTCAATTGGTTTCA 54261 | || | || || || ||| | | |||||||| || | | || || ||| | Sbjct 5325 GCGAGCTTGTATCCTGCTTCCTGCTTGAAATGGACGACTCCCTTAACTCCATTAACTATG 5266 Query 54262 ATATCAATAC-TGCAATGCAATTATCTAAAATTGGCGGCGGCGTTGCCTTAAACCTTTCT 54320 | || || |||| |||| | || ||||| ||||||||||| || | ||||| || Sbjct 5265 TGCTGAACACCTGCA-TGCAGCTGTCCAAAATCGGCGGCGGCGTAGCGGTCAACCTGTCC 5207 Query 54321 AAACTTAGAGGAAGAAAAGAGCAAATTAAAGGTATTGATGATGCTGCTTCTGGAGTAGTA 54380 || || | ||| | || |||||||| | || | || || || | | Sbjct 5206 AAGCTGCGCGGACGCGGCGAAGCCATTAAAGGCGTGGAAGGCGCGGCCAAAGGCATTATG 5147 Query 54381 CCAGTTATGAAACTTTTAGAAGATAGCTTCTCTTATGCTAATCAGCTTGGCCAAAGAAAA 54440 || || |||| || | || ||| ||||| ||||| |||| | || ||| | ||| Sbjct 5146 CCGGTCCTGAAGCTGATGGAGGATGCTTTCTCCTATGCGGATCAAATGGGACAACGCAAA 5087 Query 54441 GGCGCTGGAGCTGTTTACTTAAACATCTTCCACTGGGATATTATTGAATTCTTAGATACT 54500 || | || || | ||||| ||||| ||| |||||| |||| || ||| | || | Sbjct 5086 GGTTCGGGCGCAGGTTACTACAACATTTTCGGCTGGGACGTTATCGAGTTCCTGGACAGC 5027 Query 54501 AAAAAGATCAATGCTGATGAAAAAGCCAGAATTCAATCTTTATCTATTGGATTAATTGCT 54560 ||||||||||| || || |||| | || | | || | || || || || | |||| Sbjct 5026 AAAAAGATCAACGCGGACGAAAGAACCCGCCTCAAAACGTTGTCCATCGGCCTGATTGTG 4967 Query 54561 GAAAAAATCTTCTTCCAATTAGCAAAAAGAAACGAAGAAATGTATGTTTTTGCTCCTCAC 54620 || |||| | | || || ||| | || |||| |||| |||| || Sbjct 4966 CCTAACCGTTTCTATGAGCTTGCGAAGGACAACCAGCCGCTGCATGTGTTTGGTCCTTAC 4907 Query 54621 TCGGTTTACAGAGCTTATGGTGAACATTTAGATGACATGGATTTAAATGTTATGTATGAT 54680 || | | |||||| || | |||| | || ||||||||| | | | |||||||| Sbjct 4906 AGCGTGTTTAAAGCTTACGGCGTACATCTCGACGACATGGATATGGACGAAATGTATGAC 4847 Query 54681 AAGTTAGTTAAAAACC-CAGCTGTTAAGAAACGTAAGTTAAATTTAACTGCTCGCGAAAT 54739 ||| | | | || | || || |||| | ||| | | ||| || ||||| || Sbjct 4846 AAGCTGATGGCAGACGACCGC-GTGCAGAA--GAAAGCTGTCATGAAC-GCGCGCGACAT 4791 Query 54740 GCTTATTAAAATTGCTATTATTCAATTAGAATCTGGCTACCCTTATTTTATGTACAAAAC 54799 ||| | || || ||||| | || | ||||| |||||||||||| ||||| ||||||| Sbjct 4790 GCTGACGAAGATCGCTATGGTCCAGCTGGAATCCGGCTACCCTTATATTATGAACAAAAC 4731 Query 54800 TAACGCTAATGATACTCACGCATTAAAAGATATTGGCCAAGTTAAAATGAGTAATCTTTG 54859 ||||| ||| | || || | |||| || || || | |||||| || || || Sbjct 4730 CAACGCCAATAAGGACCATGCCCTGAAAGGCATCGGACAGATCAAAATGTCCAACCTGTG 4671 Query 54860 TACGGAAATCTTCCAATTACAAGAGACATCTACTATTAATAACTATGGTACTGATGATGA 54919 ||||| || |||||| | || || || || ||||| | || || | || || | Sbjct 4670 CACGGAGATTTTCCAACTGCAGGAAACTTCCGAAATTAACGATTACGGGATGGAAGACCA 4611 Query 54920 AATCAAGAGAGATATCAACTGTAATTTAGGTTCATTAAATATTGTTAATGTAATGGAATT 54979 ||| | || |||| ||| || | | ||| | || || || || || ||||| | Sbjct 4610 GATCCGCCGCGACATCAGCTGCAACCTGGCTTCGCTGAACATCGTAAACGTGATGGAGTC 4551 Query 54980 AAAAGCAATTAGAGATTCAGTTCATGCTGGTGTCGAAGCATTAACATCAGTTTCTGATAT 55039 || || | || || ||||||| || | || || || || || ||||| Sbjct 4550 GAAGAAGATCCGCGAGTCTGTTCATGAAGGCATGACCGCTTTGACTTCCGTCAGCGATAT 4491 Query 55040 TACTTCAATTGAAAATGCCCCTACAGTTAAGAAAGCTAATGATGAACTTCACGCTATTGG 55099 || | | ||||| || || |||||| || ||| | || | |||| Sbjct 4490 GACCGACGTAGGCAATGCGCCGGGCGTGGCGAAAGCCAACCGCGAAATGCATTCCGTTGG 4431 Query 55100 TTTGGGTTCTATGAACTTACACGGATGGTTAGCTAAAAATAAAATTAATTACGAATCTCC 55159 | ||| |||||| | ||||| | || || || || ||||| ||| ||| Sbjct 4430 ACTTGGTGTGATGAACCTGCACGGCTATTTTGCGAAGAACAAAATCGCTTATGAAAGCGA 4371 Query 55160 TGAAGCTCTAGATTTCGTTAGAACTTTCTATATGGCAGTAAACTACTATTCTATTGAGAA 55219 || || ||| |||| | | |||| |||||| | ||||| ||||| || || || Sbjct 4370 AGACGCGAAAGAATTCGCACGTGCCTTCTTTATGGCCATGAACTATTATTCGATCGAAAA 4311 Query 55220 AAGTATGATGATCGCTAAAGAAACTGGGGTTAAGTTTAAAGACTTTGAAAGATCAGAATA 55279 ||| ||||||||||| ||||| || | | |||| ||||| || | ||| ||||| Sbjct 4310 AAGCATGATGATCGCCGTTGAAACCGGCGAAACGTTTGCGGACTTCGAGAAATCCGAATA 4251 Query 55280 TGCAAAAGGTACTTATTTTGCTAAATATCTTAAAAACGATTACTCTCCTAGAACTGAAAA 55339 || || || |||||| | || || | | || ||| ||| | | || Sbjct 4250 CGCTAACGGCCATTATTTCGAGCGCTACCTGGACACGGACTACCGTCCGACCAGCGACCG 4191 Query 55340 AATCAAACAAATGTTTGATGGAATTGAAATTCCTTCTCAATCAGATTGGGA-GAATTTAA 55398 | || |||| || || | || ||||||||| ||||||| || | || Sbjct 4190 CGTGAAGGCTTTGTTCGAAGGCCTGGAGCTTCCTTCTCCGCAGGATTGGGCCGAGCTGAA 4131 Query 55399 TGTTTGATGTTAAGAAATATGGTTTATACCATGCTTACCGTCTGGCAACAGCACCAACAC 55458 | | ||||| ||| | || | |||||||||||||| |||| | || || || Sbjct 4130 AGCA-GCTGTTATGAAGAACGGGCTGTACCATGCTTACCGGATGGCGATTGCGCCGACGG 4072 Query 55459 AAAGTATTTCTTATATTCAAAATGCAACGCCAAGTGTTATGCCAATTGTAGATCATATTG 55518 || ||||| ||||| || || | || | || || ||||| || || || || || | Sbjct 4071 CCAGCATTTCCTATATCCAGAACTCCACTTCCAGCGTAATGCCGATCGTGGAGCAGATCG 4012 Query 55519 AAGCTAGAACATATGCTAACTCTACAACATACTATCCAATGCCTTATTTGTCATTAGATA 55578 || | | || ||||| || || ||||| || |||||||||||||||||| |||| Sbjct 4011 AAACGCGGACTTATGCGAATTCAACAACTTATTATCCAATGCCTTATTTGCAGCGCGATA 3952 Query 55579 CTTTCTGGTATTATAAATCAGCATATAATACAAATCAATTTAAATTAATTGACATTATTG 55638 | ||| | |||||||| | ||||| | |||| || || | | ||| | || | Sbjct 3951 ATATCTTTTTCTATAAATCTTCTTATAACATGGATCAGTTCAAGGTGCTGGACCTCATCG 3892 Query 55639 CTGAAATGCAAGAACATGTAGACCAAGGTATTAGTACAATTTTATATGTAAATAGCGATA 55698 | || || || || || |||||||||||| || || | | || || ||| | Sbjct 3891 CCGAGATTCAGCCGCACGTGGACCAAGGTATTTCGACGATCCTGCACGTGAACAGCAACG 3832 Query 55699 TTACCACTAGCGAATTAGCTAGATATTATATTTATGCAAGTGAAAAAGGATTAAAGAGTC 55758 | || || | |||| ||| | || ||| | ||||| | | |||||| | || | | Sbjct 3831 TGACGACACGTCAATTGGCTCGTTACTATCTGTATGCGGCTCATAAAGGACTGAA-ATCC 3773 Query 55759 TT-TACTACACTAGAACGAATAATTTAGGTGTTAACGAATGTGAGACTTGTTCAGTTTAA 55817 || || ||||| | || || || | || | |||||| |||||| || || | | Sbjct 3772 TTGTATTACACGCGGACCAAAAAGCTGTCCGTAGAAGAATGTCTGACTTGCTCCGTCTGA 3713 Query 55818 TT 55819 || Sbjct 3712 TT 3711 >seq150 Length=10434 Score = 89.7 bits (98), Expect = 2e-12 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 58666 CCGTGGTGTAGCGGT-TAACACGCCTGCCTGTCACGTAGGAGATCGCCGGTTCGAATCCG 58724 ||||||||||| || ||||| |||||||||||||| |||||||||| ||||||||||| Sbjct 1184 CCGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAATCCC 1243 Query 58725 GTCGGGGCCGCCAT 58738 ||||| ||||||| Sbjct 1244 GTCGGTTCCGCCAT 1257 >seq75 Length=349689 Score = 89.7 bits (98), Expect = 2e-12 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 58666 CCGTGGTGTAGCGGT-TAACACGCCTGCCTGTCACGTAGGAGATCGCCGGTTCGAATCCG 58724 ||||||||||| || ||||| |||||||||||||| |||||| ||| ||||||||||| Sbjct 253245 CCGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGACCGCGGGTTCGAATCCC 253304 Query 58725 GTCGGGGCCGCCATTA 58740 ||||| ||||||||| Sbjct 253305 GTCGGTTCCGCCATTA 253320 >seq45 Length=67623 Score = 89.7 bits (98), Expect = 2e-12 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 58666 CCGTGGTGTAGCGGT-TAACACGCCTGCCTGTCACGTAGGAGATCGCCGGTTCGAATCCG 58724 ||||||||||| || ||||| |||||||||||||| |||||||||| ||||||||||| Sbjct 2480 CCGTGGTGTAGAGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGGGTTCGAATCCC 2421 Query 58725 GTCGGGGCCGCCAT 58738 ||||| ||||||| Sbjct 2420 GTCGGTTCCGCCAT 2407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591907014205568