Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_025453.1 Length=40286 Score E Sequences producing significant alignments: (Bits) Value seq63 345 1e-90 >seq63 Length=35995 Score = 345 bits (382), Expect = 1e-90 Identities = 986/1512 (65%), Gaps = 33/1512 (2%) Strand=Plus/Plus Query 8521 AACATTATTAGTTTTGCCTACAGGCTGTGGTAAAACGATAGTATTTAGCAAAATAATTGA 8580 |||||| | || | || || |||||||| || || || |||||| ||| ||||||| Sbjct 6269 AACATTGCTTGTCCTTCCGACTGGCTGTGGCAAGACCATTGTATTTTCAAAAGTAATTGA 6328 Query 8581 AGACCGCGTAAGGGCAGGCGAGCGTGTGCTCGTCCTTGCTCATCGTGGTGAATTATTAGA 8640 ||||| |||||| |||||||| ||||||||||| || || || || || | | || Sbjct 6329 GGACCGGGTAAGGCTGGGCGAGCGCGTGCTCGTCCTGGCCCACCGCGGCGAGCTGCTCGA 6388 Query 8641 TCAAGCCTCTGACAAATTAGAAAAGTCAACAGGGCTAAAAACAGCAACTGAAAAAGCAGA 8700 |||||| | || || || | |||||||| || | | || || |||||||| || Sbjct 6389 TCAAGCAGCCGATAAGTTGGCCAAGTCAACTGGTTTGGGATGTGCGACGGAAAAAGCGGA 6448 Query 8701 ACAGACTAGTCTAGGCAGTTTTTTAAGAGTAGTTGTTGGTTCTGTGCAAAC---CATGCA 8757 |||||| |||| || | || | || ||||||||| ||| || || |||| Sbjct 6449 GCAGACTTCAATAGGAAGCTGGTTCCGGGTTGTTGTTGGTAGTGTTCAGACGCTCATGA- 6507 Query 8758 ACGAGAAAAACGTTTAAGTAAGTTTCCACCAGATTATTTTGACACTATAGTAGTTGATGA 8817 | || || | ||| | | ||| | | |||| || || || | | ||||| Sbjct 6508 --GGGATAAGAGGTTACGGCAATTTGCTGCGAGCCATTTCGATACGATCATCATCGATGA 6565 Query 8818 AGCTCACCACTG--TATCAGTGAAGGGTATCAACGAGTATTAAAACATTTTGATGAATCG 8875 || || || || |||| | | | |||||||| || | | |||| | | || Sbjct 6566 GGCACATCATTGCTTATCCGACA--GTTATCAACGGGTCCTGGACTATTTCAAAAAGGCG 6623 Query 8876 AATGTGTTAGGCGTAACCGCAACGCCAGATCGTGGAGACATGAGAAATCTAGGTTCTTAT 8935 || ||| |||||||||| || || |||||||| || ||||||||||| | || || || Sbjct 6624 AACGTGCTAGGCGTAACAGCTACACCAGATCGCGGCGACATGAGAAACTTGGGCTCCTAC 6683 Query 8936 TTTGAAAGTTTAGCTTATGAATATTCATTAGTGCAAGCTATCAAAGAAGGGTATCTATCA 8995 ||||||||||| || ||||||||| | || | |||| |||||||||||||| || Sbjct 6684 TTTGAAAGTTTGGCCTATGAATATACGCTACCGAAAGCCATCAAAGAAGGGTACCTCAGC 6743 Query 8996 CCAATAAAGGCCCTAACTATTCCTTTAAAATTAGATTTATCAGGTGTAAAACAGCAAACT 9055 || || |||||| | || ||||| | || | || || || | || ||||| | Sbjct 6744 CCGATCAAGGCCATGACCATTCCCCTCAAGCTGGACTTGTCGGCCGTCGGGCAGCAGGCG 6803 Query 9056 GGCGATTTCTCTACTAAAGATTTAGGAACGGCATTAGATCCATACTTGGAACAAATTGCT 9115 || || || | | || | || || || || || || ||| | ||| || ||| Sbjct 6804 GGAGACTTTAAATCCAGCGACCTGGGCACCGCTTTGGACCCTTACCTAGAATCGATAGCT 6863 Query 9116 GAAGAAATG----GTTAAACACTGCATAAACAGGAAAACAGTTGtttttttACCATTAGT 9171 | ||||||| | | | | | | | |||||| || || || | || | || Sbjct 6864 GCAGAAATGTGGCGGGTAGCCCAGGA----CCGGAAAATCGTCGTGTTCCTGCCGCTTGT 6919 Query 9172 TAAAACTTCCAAAAAATTTAGAGACATTTTAAATAGTAAAGGTTTTAGAGCTGCAGAAGT 9231 || || | | ||||| | ||| || || || || | ||||| | |||||||| || Sbjct 6920 AAAGACCAGCCAGAAATTCACAGAAATATTGAACAGGATCGGTTTCAAGGCTGCAGAGGT 6979 Query 9232 AAATGGAGATTCAAAGGATCGTCAAGAAATTTTAGAAGATTTCGACAATGATAAATATAA 9291 ||| ||||| ||| |||| || ||| | | || ||||||||||| | ||||| || Sbjct 6980 AAACGGAGAATCACAGGACCGGGCGGAAGTGCTGGAGGATTTCGACAAGGGAAAATACAA 7039 Query 9292 CGTACTCTGCAACTCGATGTTACTAACAGAAGGCTGGGATTGCCCTTCGGTGGATTGTGT 9351 || || |||||| ||| | || || || ||||||||||| || ||||||||||| Sbjct 7040 TGTCCTTTGCAACAGCATGCTGCTGACGGAGGGCTGGGATTGTCCAAGTGTGGATTGTGT 7099 Query 9352 AGTCGTTTTAAGACCAACAAAAGTTCGGTCCTTATATTCTCAAATGATAGGACGTGGCAC 9411 || || | | || || || || || |||||| || ||| | || ||||| || Sbjct 7100 TGTGGTCCTGCGGCCGACGAAGGTCCGCAGTTTATATAGCCAGATGGTCGGGCGTGGTAC 7159 Query 9412 ACGTTTATTTCCTGGAAAGGAAGAATTATTGCTTTTAGATTTTTTATGGCATACAGAAAG 9471 || | || || || ||||||||||| || | | ||||| | |||||||| ||| | Sbjct 7160 CCGGCTGTTCCCCGGCAAGGAAGAATTGCTGTTACTTGATTTCCTTTGGCATACCGAACG 7219 Query 9472 ACATGAGTTGTGCCATCCAGCGCATTTGATAGCAAATAGTGATGAAGTAGCTaaaaaaaT 9531 |||||| | || ||||| ||||| ||||| ||| | | ||| ||||| || || || Sbjct 7220 TCATGAGCTTTGTCATCCGGCGCACTTGATCGCAGAGAATGAAGAAGTTGCCAAGGCCAT 7279 Query 9532 GACTGAGAACATTGAAGAAGCAGGTGCTCAAGGTTTCGCTATGGATNNNNNNNNNNNNNN 9591 ||| || | || || ||||| || || || ||| ||||| Sbjct 7280 GACCAAGCAGATCGAGGAAGCGGG----CA---TTCCGC--TGGATCTGGAAACGGTCGA 7330 Query 9592 NNNNNNAGCAGAAAAAGATGTTATTGCAGAAAGAGAAGAAGCATTAGCAAAGCAGCTTGA 9651 || | | |||||| | || | | ||||| || | || || ||||| || Sbjct 7331 GAAGCAGGCCGCCGAGGATGTTGTCGCGGCTCGGGAAGAGGCCCTTGCGAAACAGCTGGA 7390 Query 9652 AGAAATGCGTAAGCGTAAACGAAAATTAGTTGATCCTCTTCAATTTGAAATGTCTATCCA 9711 ||||||| |||||| || ||| ||||| || || || ||||||||| ||| || Sbjct 7391 AGAAATGAAGCGGCGTAAGCGGGCATTGGTTGACCCGCTGCAGTTTGAAATGAGTATTCA 7450 Query 9712 AGCGGAAGATTTAACTGGTTATGTTCCTAGTTTTGGATGGGAAATGGGGCCGCCTTCAAG 9771 ||| || ||| | | | |||||||| || || ||||||||||| ||||| | Sbjct 7451 AGCCGAGGATCTTTCCAGCTATGTTCCGGCATTCGGCTGGGAAATGGGACCGCC-GAGCG 7509 Query 9772 TCAACAAGTTTCAG-CATTAGAAAAATTAGGAATATTACCAGATGCAATTGATAACGCTG 9830 | | || | || | || ||||| | || || | || ||| || |||||||| | Sbjct 7510 ACGCCCAGGTCAAGACGTTGGAAAAGCTTGGGATCCTGCCGGATCAGATAGATAACGCCG 7569 Query 9831 GTAAAGCTAGTCTAA--TACTTGATCGATTACAAAAAAGAAAAGAAGCTGGGTTGGCAAC 9888 | || || | | || | || || |||| | || | | | ||| | | || Sbjct 7570 GCAAGGC--GACGAAGCTGCTGGAGAGATTGGACAAGCGGCGCGCCGAAGGGCTCACGAC 7627 Query 9889 ACCTAAGCAAATCAGATTATTGGAACAGCGTGGATTTAAGAATGTCGGTACATGGTCCTT 9948 || ||||||||| | || ||||| ||||| || || || | ||||| || ||||| || Sbjct 7628 TCCGAAGCAAATCCGCTTCTTGGAGCAGCGCGGGTTCCAGCACGTCGGAACCTGGTCATT 7687 Query 9949 TGATGGTGCAAGTAAAATGATTAATCGCATTGCTGCAAATGGATGGAGATTACCAAATGG 10008 |||| || | ||||| |||| || || | || ||||||| | | || | || Sbjct 7688 TGATACAGCCAAGCGTCTGATTGATCGGATCGCCGGCAACGGATGGAAAGTTCCGGACGG 7747 Query 10009 TATTAATCCAAA 10020 ||| |||| || Sbjct 7748 AATTGATCCCAA 7759 Score = 147 bits (162), Expect = 6e-31 Identities = 191/264 (72%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 5256 ATTGTCAGTAAAAGATGGTGAGTTGGTTTATAAAGGACAGCAGTGGGACAACATGAGTGG 5315 |||||| || | |||||||| || | ||||| || |||| |||||||||||||| || Sbjct 4106 ATTGTCGGTCGAGAATGGTGAGCTGCTGTATAACGGCCAGCGCTGGGACAACATGAGCGG 4165 Query 5316 TTCAGATCAATTAAAAGTTTCAACTGCAATCGTACGCAAACTAAAACCTCAATGTGGCTT 5375 | || || | || || || | || || || |||||||| ||||| | || || || Sbjct 4166 CGCCGACCAGCTCAAGGTAGCAGCGGCGATTGTTCGCAAACTTAAACCGGAGTGCGGTTT 4225 Query 5376 TGTTTTGTTAGATAAATTGGAACAGATGGATATGATTACACTGAATGAATTTAGTCAGTG 5435 | | || | || || |||| |||||||||||| | || || || | |||| Sbjct 4226 TATCCTGCTGGACAAGCTGGAGCAGATGGATATGGACAGCCTACGCGAGTTCGGGGAGTG 4285 Query 5436 GCTGCAACAAGAAGGATTACAAGCCATTGCTACCAGAGTGTCTACTGGGGAAGAATGTAG 5495 |||| |||| |||||| | || ||||| |||||| |||| ||| |||||||| || || Sbjct 4286 GCTGGAACAGGAAGGACTGCAGGCCATCGCTACCCGAGTAAGTACCGGGGAAGAGTGCAG 4345 Query 5496 CATCATTATTGAAGATGGATATGT 5519 ||||||||| ||||| || ||||| Sbjct 4346 CATCATTATCGAAGACGGCTATGT 4369 Score = 84.2 bits (92), Expect = 6e-12 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 8219 GTTCCAAACCCTGTAGAACTTGCACCGTATCGAACATTTTTAGAAGTCGAACAACCTGAA 8278 ||||||||||| ||| ||| ||||| ||||| || || | || | || || || ||| Sbjct 2154 GTTCCAAACCCAGTAACACTAGCACCTTATCGGACGTTCGTCGAGGCCGGCCAGCCAGAA 2213 Query 8279 AGTCAATTTATTTTCCGTATGAAAGATGGCCCTCGTTGTGCAATCTTTGAAGCAGATGGT 8338 ||| ||| | ||||| ||| || |||| |||||| ||| | || ||||| || ||| Sbjct 2214 AGTGCATTCGTGTTCCGGATGCAAAATGGTCCTCGTGCAGCATTGTTCGAAGCTGACGGT 2273 Query 8339 GGGGCATGGAGAAATCAAGCAATT 8362 || || ||| | ||| | |||||| Sbjct 2274 GGTGCTTGGCGCAATGATGCAATT 2297 Score = 80.6 bits (88), Expect = 7e-11 Identities = 116/161 (72%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 5908 TTTGGTTATGGAGAGGGCTTTATAAAATTAGAAGAAGAATTTGGGCG-TTTCTTAAACAA 5966 ||||| ||||| |||| | | || | | | ||||||| | || || ||||| || | Sbjct 4799 TTTGGATATGGCAAGGGTTATGTATACGTTGCAGAAGAAGTCGGCCGATTTCTCAATCT- 4857 Query 5967 GCTATCAGATTTAACGGAACTAGGAATTAACGTTGTTCTTACAGCTCATGCCAAAATTGT 6026 ||| ||| || ||| || || | ||||| || || ||||||||| ||||| | Sbjct 4858 GCTCAGCGATGTAGTTGAAGCGGGCATCCATGTTGTGCTGACGGCTCATGCCCAAATTAT 4917 Query 6027 AAAGTTTGAACAGCCAGATGAAATGGGTGCTTATGATCGTT 6067 || ||||| ||||| ||||||||||| ||||| ||||||| Sbjct 4918 CAAATTTGAGCAGCCGGATGAAATGGGCGCTTACGATCGTT 4958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128793346115616