Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq79 212 9e-49
seq68 111 2e-18
seq136 98.7 1e-14
seq100 91.5 2e-12
>seq79
Length=767515
Score = 212 bits (234), Expect = 9e-49
Identities = 287/396 (72%), Gaps = 23/396 (6%)
Strand=Plus/Plus
Query 259790 GTCGTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCC 259849
|||| ||| || || ||| | |||||||||||||||||| | ||| | | |||
Sbjct 3404 GTCGCCGAACGCCCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCA---- 3459
Query 259850 GACGTCGACAATGCGCTGGAGCACGTGCTCGCCACC-TACGAGGCCATGTCGCAGCAGTT 259908
||||| | |||| ||| || || | ||| | |||||| ||| ||
Sbjct 3460 -----CGACA------TCGAGCGCGT-CTTGCAGTCGTACAACCTCATGTCCGAGCGGTA 3507
Query 259909 GTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTC 259968
|| ||| || |||| |||||||| || ||||| ||||| | ||||||| ||||||
Sbjct 3508 CTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTC 3567
Query 259969 GTGCTTTCTGTTGGACA---TGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAA 260025
||| ||||| ||| || |||||| ||||||||||| |||||||| |||||||||||
Sbjct 3568 GTG-TTTCT--TGGTCACGATGAAGGATGATTCGATCGAAGGCATCTACGACACGCTCAA 3624
Query 260026 GCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCG 260085
| |||||| |||||||||||| | ||||| || |||||||| | ||||| | ||
Sbjct 3625 GACGTGCGCTCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCG 3684
Query 260086 CGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCT 260145
||| | ||| ||||| | || ||||| |||||| | || |||||| | || ||||||||
Sbjct 3685 CGCGACCGGCTCCTACATTGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCT 3744
Query 260146 TCGCGTTTTTAACGACACGGCGCGCTACGTCGACCA 260181
|| || | || |||| |||||||||||||||||
Sbjct 3745 CCGTGTCTACAATAACACCGCGCGCTACGTCGACCA 3780
Score = 123 bits (136), Expect = 4e-22
Identities = 299/456 (66%), Gaps = 8/456 (2%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|| ||| |||||| || ||||| || |||||| || ||||||||||| ||| ||
Sbjct 3782 GGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCTGACGTC 3841
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
|| | | |||||||| |||||||||||||| |||| ||| |||| ||
Sbjct 3842 TTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAA-GGAG-----GAAGTCCGCGCTCGT 3895
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|||||||||| | || |||| ||| || || ||| || | | | ||| | ||
Sbjct 3896 GATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGGC 3955
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|||||| | ||||| ||||| |||| || ||||| || |||||| |||||||| |
Sbjct 3956 GACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAAGTCTATGGCGAAGAG 4015
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTCG-TGCCCGC 262086
|| | ||| | | ||| | || | || | |||||
Sbjct 4016 TTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGA-AGACGATCCCCGC 4074
Query 262087 ACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGT 262146
| | || | |||| || ||| ||| |||||| |||| || |||| |||| |||| |
Sbjct 4075 GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTTCATGCT 4134
Query 262147 CTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGC 262206
|||||||||||||| ||| || ||||| ||||||| ||||| | | | |
Sbjct 4135 CTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTC 4194
Query 262207 CAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCC 262242
|| |||||||||||||| || ||| ||| ||||
Sbjct 4195 GAATTTGTGCACCGAGATCATCGAGTACTCGGCGCC 4230
Score = 93.3 bits (102), Expect = 6e-13
Identities = 171/243 (70%), Gaps = 6/243 (2%)
Strand=Plus/Plus
Query 263172 CGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCC-CAACCGGGTGACCATTGATA 263230
|||||||||||| ||| ||||||||| |||||| | | ||| | | | || |||
Sbjct 5141 CGATCTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACT-ATTATCGATC 5199
Query 263231 TGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCG 263290
|| ||||||| || | ||| | |||||| || ||||||||| | || | | ||
Sbjct 5200 TGTCGGCCGATCGAGGTGCCTTCATTGACCAGTCGCAATCGCTCAACATCCACTT-GTCG 5258
Query 263291 A-CCCGACGGCCGAG-AGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAA 263348
| ||||||| | | ||| |||||||||||||| ||| | ||| || || || ||
Sbjct 5259 AGCCCGACGATGGCGCAGC-TCACGTCGATGCACTTCTACGGCTGGAAGCGAGGACTGAA 5317
Query 263349 GACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGA 263408
||| || |||||||| ||||||| || |||| | | || || | |||||||||||
Sbjct 5318 GACGGGTATGTACTACTTGCGCACGCGCGCCGCCGTCGGTGCAATCAAGTTCACCGTCGA 5377
Query 263409 TCA 263411
||
Sbjct 5378 CCA 5380
>seq68
Length=952209
Score = 111 bits (122), Expect = 2e-18
Identities = 171/238 (72%), Gaps = 7/238 (3%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| |||| | |||| || ||||||||||| ||||||||||||||||| ||| | |||
Sbjct 96127 GATCTGGGCACAGTAC-AAGAAGGCCGAGGCATCCTTTTGGACCGCCGAAGAGATGGACT 96185
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
| | |||| | | |||||| ||| | |||||||||| | ||||||
Sbjct 96186 TGTCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGACGAGCGCTACTTCATCT 96245
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||||||||||||| |||||||||||| ||| |||||||| ||||||| ||| ||
Sbjct 96246 CGCACGTCCTCGCC-TTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAG 96304
Query 1455952 CGCTT-TATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
|| || | || |||||||| | | ||||| || | || ||||| || || |||
Sbjct 96305 CGATTCTCTG-GTGAGGTCCAGTCAGCCGAGGCTCGATGCTTCTACGGTTTTCAAATC 96361
>seq136
Length=578008
Score = 98.7 bits (108), Expect = 1e-14
Identities = 160/227 (70%), Gaps = 10/227 (4%)
Strand=Plus/Plus
Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975
||||||| | ||||| || |||||| |||| | || || |||||| | |||
Sbjct 36695 CAAGGTGTTGAAGCAAGTCCACCCCGACACCGGT-----ATT-TCGAACAAGGCGATGCT 36748
Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC-- 725033
|||| | |||||||| ||||||||||| |||| ||||||| | ||| || |||
Sbjct 36749 GATCCTCAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCCTCGAAGC--GTCCAAA 36806
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|| ||| | |||| || | || ||| ||||||||||||||||| | || ||
Sbjct 36807 CTCGCGAAATACAACCAGAGATTGACCATCTCGTCGCGCGAGATCCAGACCTCGGTCCGA 36866
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||||| | | ||| || ||| ||| ||||||| |||| || |||||
Sbjct 36867 TTGATCCTCCCCGGAGAGCTGTCCAAGCACGCCATCTCGGAAGGCAC 36913
>seq100
Length=1345518
Score = 91.5 bits (100), Expect = 2e-12
Identities = 136/189 (72%), Gaps = 8/189 (4%)
Strand=Plus/Plus
Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017
||| |||||| | ||| ||| | |||||||| ||||||||||| | || ||||||
Sbjct 305307 CTCGAACAAGGCGATGCTCATCCTCAACTCGTTCGTCAACGACATCTTTGAGCGCATCTC 305366
Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCA-ACAAGCGCAAC---ACGATCGGCACGCGCG 725073
|| |||||| ||| | || ||| | | |||| ||| |||||| ||||||
Sbjct 305367 CATCGAGGC--GTC--CAAGCTCGCGCTATACAATAACAAGGCGACGATCACGTCGCGCG 305422
Query 725074 AGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCG 725133
|||||||||| | || ||| ||||| | | || ||| || ||| ||||||| |||| |
Sbjct 305423 AGATCCAGACTTCGGTTCGCTTGATCCTCCCTGGAGAATTGTCCAAGCACGCCATCTCGG 305482
Query 725134 AGGGCACCA 725142
| |||||||
Sbjct 305483 AAGGCACCA 305491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177795188994892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |