Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq79 86.0 9e-12 >seq79 Length=767515 Score = 86.0 bits (94), Expect = 9e-12 Identities = 245/373 (66%), Gaps = 3/373 (1%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 || || | ||| || |||||||||||||| || || | ||||||||| | | | | Sbjct 3942 ACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGCGGACT 3883 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 || || || || || || ||| || || ||||| | | |||| ||||| || Sbjct 3882 TCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCCACGGC 3823 Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774 || || || ||||| | | |||| || || || || || || || || | ||| | || Sbjct 3822 TCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCG 3763 Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834 |||||||| ||||| | ||||| || | || || || || | || || || || | | Sbjct 3762 GTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGCCGGCA 3703 Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894 || || || | ||||| || || || | ||| || || || || | || Sbjct 3702 ATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTG 3643 Query 69895 GAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 ||||| ||||| | |||| || | ||||| || || || || || |||||| |||| Sbjct 3642 GAGATGAGAGCGC-ACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCTTCAT 3584 Query 69954 -GTTAAGAAGAAA 69965 || | |||||| Sbjct 3583 CGTGACCAAGAAA 3571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907374664240