Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq79 168 8e-37
seq89 134 2e-26
seq68 107 2e-18
>seq79
Length=767515
Score = 168 bits (186), Expect = 8e-37
Identities = 555/857 (65%), Gaps = 13/857 (2%)
Strand=Plus/Minus
Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295
||||| || ||||| ||||| || || ||| ||| | | |||||| | || ||
Sbjct 4266 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4207
Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355
|| || || || || ||| ||||| || | ||||||||||| ||||||||
Sbjct 4206 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4147
Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415
|| ||||||||||||||| |||| | || || || ||| | | |||||| || | |
Sbjct 4146 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4087
Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474
|||| | | || || || | | ||||| || |||||| ||||| || | |
Sbjct 4086 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4028
Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534
| ||| | ||||| || || | ||| |||||| || || | | | || |||||
Sbjct 4027 CAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAA 3968
Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594
|| | ||| | || | |||| || |||| |||||| || || |||||||| || |
Sbjct 3967 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 3908
Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654
|||||||||| | | || | || || | || ||||| || | || |||||
Sbjct 3907 CAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3848
Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 111712
||| | || || |||||||| ||||| || |||| |||| | ||| |||||
Sbjct 3847 CTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 3791
Query 111713 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768
||| |||| | || |||||||| ||| || | || || ||||| || | ||
Sbjct 3790 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGAT 3731
Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828
|| | || | || || || || ||| || | || | | | |||||
Sbjct 3730 GCCGTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGAT 3671
Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888
| || || ||||| || || ||| ||||| | || ||| | | || || | ||
Sbjct 3670 GCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTA 3611
Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948
||| || | ||| || || ||||| | | || | ||| || || | ||||||
Sbjct 3610 GATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTG 3551
Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-TTGGGACATCT 112007
|| || || || |||||||| || || | ||||| | || |||| | ||||||
Sbjct 3550 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACATGA 3492
Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067
|| ||| | || |||||| || ||||| | |||||| ||||||| ||||| ||||
Sbjct 3491 GGTTGTACGACTGCAAGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCA 3432
Query 112068 TGAACATGTACTGTGGG 112084
||| ||||| ||| |||
Sbjct 3431 TGAGCATGTGCTGCGGG 3415
>seq89
Length=1766943
Score = 134 bits (148), Expect = 2e-26
Identities = 272/396 (69%), Gaps = 6/396 (2%)
Strand=Plus/Plus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| |||||||| | || ||| ||| || |||| || || |||
Sbjct 83316 CCGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGCCGTCCAGATCCCTCAATC 83375
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| |||||| |||| || ||| ||||||||| | ||| | || ||
Sbjct 83376 CGAGACGACGCCCTTCCACCCTCGTTCGCCATACGGAGTCGCCAAGTTGTACGCCTTCTG 83435
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| |||||||||| ||||||||| | |||| ||| |||||| ||| ||| | |||||
Sbjct 83436 GATCGTCAAAAACTACCGCGAGGCGTACGATATGTACGCGTGCAACGGTATCTTGTTCAA 83495
Query 9335 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 9392
||| || || ||| | || ||| ||| |||||| || | |||||| | ||||| | ||
Sbjct 83496 CCACGAGTCCCCGCGTCGTGGTCGCAC-CTTTGTCACAAGGAAGATCTCCCGAGC-TGTC 83553
Query 9393 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 9452
| ||| | ||| || |||| | | | | | || || || | || || |
Sbjct 83554 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 83613
Query 9453 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 9512
|||||||| |||||| ||||| || || | ||||||| ||||| || ||||| ||
Sbjct 83614 GATTGGGGACACGCGTGCGACTACGTCGAGGGTATGTGGAGGATGCTGCAGCAAGAC-AA 83672
Query 9513 GCC-GACGAATATGTAGTAGCAACGGGTGAGACCCA 9547
||| ||||| | ||| | || ||||||||||||||
Sbjct 83673 GCCTGACGACTTTGTCCTCGCGACGGGTGAGACCCA 83708
>seq68
Length=952209
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214
|||| |||| || ||||| |||| ||| ||| || ||||| ||| | || ||
Sbjct 278748 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 278689
Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274
|||| ||| ||||||||||| || ||| |||||||||| | ||| | || ||
Sbjct 278688 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 278629
Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334
| ||||||| || ||||||||||| |||| ||| |||||| ||| |||||||||||
Sbjct 278628 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 278569
Query 9335 CCATGAATCACC 9346
||| || || ||
Sbjct 278568 CCACGAGTCCCC 278557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030696833600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |