Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq79 168 8e-37 seq89 134 2e-26 seq68 107 2e-18 >seq79 Length=767515 Score = 168 bits (186), Expect = 8e-37 Identities = 555/857 (65%), Gaps = 13/857 (2%) Strand=Plus/Minus Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 ||||| || ||||| ||||| || || ||| ||| | | |||||| | || || Sbjct 4266 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4207 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 || || || || || ||| ||||| || | ||||||||||| |||||||| Sbjct 4206 GTGCACAAATTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCG 4147 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 || ||||||||||||||| |||| | || || || ||| | | |||||| || | | Sbjct 4146 GCGTCCTTGTAGAGCATGAAGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTAC 4087 Query 111416 CAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 111474 |||| | | || || || | | ||||| || |||||| ||||| || | | Sbjct 4086 CAAAGCTTTTGC-GCGGGGATCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAA 4028 Query 111475 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 111534 | ||| | ||||| || || | ||| |||||| || || | | | || ||||| Sbjct 4027 CAAGGCCTTGAACTCTTCGCCATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAA 3968 Query 111535 AAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 111594 || | ||| | || | |||| || |||| |||||| || || |||||||| || | Sbjct 3967 GAGGGGCCAGTCGCCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGC 3908 Query 111595 TGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAA 111654 |||||||||| | | || | || || | || ||||| || | || ||||| Sbjct 3907 CAAAAAGAGATCACGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3848 Query 111655 CTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC-- 111712 ||| | || || |||||||| ||||| || |||| |||| | ||| ||||| Sbjct 3847 CTCGAAGACGTCAGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCC---GGGACGCTT 3791 Query 111713 ----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 ||| |||| | || |||||||| ||| || | || || ||||| || | || Sbjct 3790 GTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTATTGTAGACACGGAGCATGGGGACGAT 3731 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGAT 111828 || | || | || || || || ||| || | || | | | ||||| Sbjct 3730 GCCGTTCGAGTAGCCGTTCGTGCCGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGAT 3671 Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888 | || || ||||| || || ||| ||||| | || ||| | | || || | || Sbjct 3670 GCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTA 3611 Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948 ||| || | ||| || || ||||| | | || | ||| || || | |||||| Sbjct 3610 GATGCCTTCGATCGAATCATCCTTCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTG 3551 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-TTGGGACATCT 112007 || || || || |||||||| || || | ||||| | || |||| | |||||| Sbjct 3550 AGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGT-AAAGTACCGCTCGGACATGA 3492 Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067 || ||| | || |||||| || ||||| | |||||| ||||||| ||||| |||| Sbjct 3491 GGTTGTACGACTGCAAGACGCGCTCGATGTCGTGCCCGTGAATGCCGACGGCGACACGCA 3432 Query 112068 TGAACATGTACTGTGGG 112084 ||| ||||| ||| ||| Sbjct 3431 TGAGCATGTGCTGCGGG 3415 >seq89 Length=1766943 Score = 134 bits (148), Expect = 2e-26 Identities = 272/396 (69%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214 |||| |||| |||||||| | || ||| ||| || |||| || || ||| Sbjct 83316 CCGCTTCTACCAAGCCTCGACTTCCGAGTTGTACGGCAAGGCCGTCCAGATCCCTCAATC 83375 Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274 |||| ||| |||||| |||| || ||| ||||||||| | ||| | || || Sbjct 83376 CGAGACGACGCCCTTCCACCCTCGTTCGCCATACGGAGTCGCCAAGTTGTACGCCTTCTG 83435 Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334 | |||||||||| ||||||||| | |||| ||| |||||| ||| ||| | ||||| Sbjct 83436 GATCGTCAAAAACTACCGCGAGGCGTACGATATGTACGCGTGCAACGGTATCTTGTTCAA 83495 Query 9335 CCATGAATCACCGAGACGAGGT-GCAGACTTTGTGACCATGAAGAT-TACCGAGGGTATC 9392 ||| || || ||| | || ||| ||| |||||| || | |||||| | ||||| | || Sbjct 83496 CCACGAGTCCCCGCGTCGTGGTCGCAC-CTTTGTCACAAGGAAGATCTCCCGAGC-TGTC 83553 Query 9393 AAACAAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGA 9452 | ||| | ||| || |||| | | | | | || || || | || || | Sbjct 83554 GCCGAGATCTCGCTCGGTCAACAGGACTGCCTCTACCTCGGCAATATGGAGGCCAAGCGT 83613 Query 9453 GATTGGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAA 9512 |||||||| |||||| ||||| || || | ||||||| ||||| || ||||| || Sbjct 83614 GATTGGGGACACGCGTGCGACTACGTCGAGGGTATGTGGAGGATGCTGCAGCAAGAC-AA 83672 Query 9513 GCC-GACGAATATGTAGTAGCAACGGGTGAGACCCA 9547 ||| ||||| | ||| | || |||||||||||||| Sbjct 83673 GCCTGACGACTTTGTCCTCGCGACGGGTGAGACCCA 83708 >seq68 Length=952209 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 9155 CCGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAA 9214 |||| |||| || ||||| |||| ||| ||| || ||||| ||| | || || Sbjct 278748 CCGCTTCTACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTC 278689 Query 9215 CGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTG 9274 |||| ||| ||||||||||| || ||| |||||||||| | ||| | || || Sbjct 278688 CGAGACGACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTG 278629 Query 9275 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 9334 | ||||||| || ||||||||||| |||| ||| |||||| ||| ||||||||||| Sbjct 278628 GATCGTCAAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAA 278569 Query 9335 CCATGAATCACC 9346 ||| || || || Sbjct 278568 CCACGAGTCCCC 278557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030696833600