Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq79 461 8e-125 seq68 95.1 1e-14 seq98 84.2 2e-11 >seq79 Length=767515 Score = 461 bits (510), Expect = 8e-125 Identities = 798/1148 (70%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| ||||||| Sbjct 4539 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTGCGCGCC 4483 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 4482 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCTAGACCTTGCACTCC 4424 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAA 78950 ||| |||| || ||||| || | |||| || | ||||||| | |||| || | Sbjct 4423 GATGCCGATGGGGCGGTGACGGAAGTTGGAGTTCTG---CGCCTCGATGACGGGATAGTA 4367 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| ||| | ||| ||| ||||||| ||| || Sbjct 4366 GTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACAACCTTGACGACCTCGTGCAACTT 4307 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || | | | | ||| |||||| |||| | | ||| |||| ||||| Sbjct 4306 CTTAAAGTCGTACACGCCGTTCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 4248 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || ||||||||||| ||||||| Sbjct 4247 AGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAAATTCGACGACT 4188 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||| | |||||| ||||| |||| ||| ||||||||||||| |||| Sbjct 4187 TGATCGTGCCAAGGTTCTTTTGGTTCGATTTCTTGTTTGCGGCGTCCTTGTAGAGCATGA 4128 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| || ||||| ||| ||| | | | || ||| Sbjct 4127 AGGGGTTGCCAGTTTCGACCTGGGCCTCGAGAATTGCGTACCAAAGCTTTTGCGCGGGGA 4068 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||||||| ||||||| |||| || | |||| | ||||| | || | Sbjct 4067 TCGTCTTCTTGGCGCGACCCTCCTTTTCGTATTTCTCGAACAAGGCCTTGAACTCTTCGC 4008 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | || || ||| ||| ||||| | ||| ||||||| || | Sbjct 4007 CATAGACTTCGTGGAGACCGGGGGCTTCGGCGGGGCAGAAGAGGGGCCAGTCGCCGGCGG 3948 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || |||||||||||| || || ||||| || ||| ||||| || || | Sbjct 3947 CCTCGACACGCTCCATGAAGAGATCGGGAATCCAGAGCGCCAAAAAGAGATCACGAGCGC 3888 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || || || || || | || ||| ||||||| Sbjct 3887 GGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAACTCGAAGACGTCAGCGTGCC 3828 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 3827 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 3768 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||| ||| | || ||||||||||| |||||||||| | | ||||||||| | Sbjct 3767 GCGCGGTGTTATTGTAGACACGGAGCATGGGGACGATGCCGTTCGAGTAGCCGTTCGTGC 3708 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || || | ||| |||| || ||||| | | | ||||| || |||| Sbjct 3707 CGGCAATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 3648 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| | |||||| ||||||||| ||||||||||| |||||||| || |||| Sbjct 3647 TCTTGGAGATGAGAGCGCACGTCTTGAGCGTGTCGTAGATGCCTTCGATCGAATCATCCT 3588 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||| ||| || ||| | ||| |||| ||| |||||||||||||| | Sbjct 3587 TCATCGTGACCAAGAAACACGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 3528 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| || | | ||| || | ||||| || | ||||||| Sbjct 3527 TCGGCGAGGCGTGGGTAAAGTACCGCTCGGACATGAGGTTGTACGACTGCAAGACGCGCT 3468 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 || ||||| ||||| |||||||| ||||| ||||||| | || ||| |||||| ||| Sbjct 3467 CGATGTCGTGCCCGTGAATGCCGACGGCGACACGCATGAGCATGTGCTGCGGGCGT-TCG 3409 Query 79909 CCGACATT 79916 |||| || Sbjct 3408 GCGACCTT 3401 Score = 425 bits (470), Expect = 6e-114 Identities = 782/1138 (69%), Gaps = 10/1138 (1%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | ||||||| ||||| |||||||| || || ||||| || ||| ||| Sbjct 3416 CCGCAGCACATGCTCATGCGTGTCGCCGTCGGCATTCACGGGCACGACATCGAGCGCGTC 3475 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 || | ||| |||| ||| | || || ||| || ||||| ||||||| || ||| Sbjct 3476 TTGCAGTCGTACAACCTCATGTCCGAGCGGTACTTTACCCACGCCTCGCCGACGCTCTTC 3535 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 |||||||| ||| |||||||| | ||| |||||| | || | ||||||||||| Sbjct 3536 AACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCTTGGTCACGATGAAGGATGAT 3595 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 || || ||||||||||| ||||||||| |||||| | |||||||||| |||| Sbjct 3596 TCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCTCTCATCTCCAAGACCGCCGGT 3655 Query 19343 GGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAAC 19402 |||||||| | | | || ||||| ||| || | || || |||||| Sbjct 3656 GGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTACATTGCCGGCACGAAC 3715 Query 19403 GGAGTAGCCGA-CGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || || ||| ||| |||||||| |||||||| |||| ||| ||||| || | ||||| Sbjct 3716 GGC-TACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAATAACACCGCGCGCTACGT 3774 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | |||| || ||| ||| || || | ||||| |||||||||||||| |||||||| Sbjct 3775 CGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGC 3834 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 |||||| | || ||||| || || ||| |||||| || | ||||| | ||| ||| Sbjct 3835 TGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTCCGCGCTCG 3894 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || ||||| ||| | |||||||| || || ||||||||| || ||| | || Sbjct 3895 TGATCTCTTTTTGGCGCTCTGGATTCCCGATCTCTTCATGGAGCGTGTCGAGGCCGCCGG 3954 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGC 19701 || |||| ||| | ||||| |||| ||| || || | ||| ||||| ||||| | Sbjct 3955 CGACTGGCCCCTCTTCTGCCCCGCCGAAGCCCCCGGTCTCCACGAAGTCTATGGCGAAGA 4014 Query 19702 GTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGC 19761 |||||| | |||| | || |||| | |||| || ||||||| | ||| || Sbjct 4015 GTTCAAGGCCTTGTTCGAGAAATACGAAAAGGAGGGTCGCGCCAAGAAGACGATCCCCGC 4074 Query 19762 CCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTG 19821 | | | ||| || | ||| | ||||||||| || |||| || | |||| Sbjct 4075 GCAAAAGCTTTGGTACGCAATTCTCGAGGCCCAGGTCGAAACTGGCAACCCCTTCATGCT 4134 Query 19822 CTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTC 19881 ||||||||||||||| ||| || || || || |||||| | ||| ||||||||||||| Sbjct 4135 CTACAAGGACGCCGCAAACAAGAAATCGAACCAAAAGAACCTTGGCACGATCAAGTCGTC 4194 Query 19882 CAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCT 19941 || |||| || || ||||| ||| || |||||||||| ||||| || || | Sbjct 4195 GAATTTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGCAACTT 4254 Query 19942 GGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTA 20001 ||| || | |||||| ||| ||||| | | | ||||||| || ||| | Sbjct 4255 GGCCTCGATCGCGTTGCCGAGCTTCATCAAGAACGGCGTGTACGACTTTAAGAAGTTGCA 4314 Query 20002 CGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CC 20060 |||||| | ||| ||| | || |||| ||| ||||||| |||| || || Sbjct 4315 CGAGGTCGTCAAGGTTGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTATCC 4374 Query 20061 CG--ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCA 20118 || | ||| ||||| || || || | || ||||| || |||| ||||| || || Sbjct 4375 CGTCATCGA---GGCGCAGAACTCCAACTTCCGTCACCGCCCCATCGGCATCGGAGTGCA 4431 Query 20119 GGGCCTGGCCGACGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCG 20177 || || ||||||| |||||| || ||| | | ||||| ||| |||||||| Sbjct 4432 AGGTCTAGCCGACGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGCA 4490 Query 20178 AGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||||| ||||||||| || | |||||||| || || | |||||||| Sbjct 4491 AGCTCAACAAGCAAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 4548 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| || ||||| |||||||| |||||||| || || |||||| ||||| | ||| Sbjct 5348 GGCGCGCGTGCGCAAGTAGTACATACCCGTCTTCAGTCCTCGCTTCCAGCCGTAGAAGTG 5289 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| ||||| || || | |||||||||||| || ||||| Sbjct 5288 CATCGACGTGAGCTGCGCCATCGTCGGGCTCGACAAGTGGATGTTGAGCGATTGCGACTG 5229 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| | ||||| || ||||||| || ||||| | | |||||||| | |||||| Sbjct 5228 GTCAATGAAGGCACCTCGATCGGCCGACAGATCGATAATAGTCTTTTGCGAGAGCTCCCA 5169 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 5168 GACGGTCTTGTAGATGGCCTTGAGATC 5142 >seq68 Length=952209 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 96852 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 96911 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 96912 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 96946 >seq98 Length=574835 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || || ||||||||||| || ||||||||||| ||||| ||||||||||||||| || Sbjct 179854 ATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTCTTTCTCCAACGAGCTCATA 179795 Query 60099 TCCCGGGACGAGGGCCTCCAT 60119 ||||| ||||| || || ||| Sbjct 179794 TCCCGCGACGAAGGTCTTCAT 179774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523661811040