Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq75 132 1e-26 >seq75 Length=349689 Score = 132 bits (146), Expect = 1e-26 Identities = 222/317 (70%), Gaps = 8/317 (3%) Strand=Plus/Minus Query 35858 GGATGCTGAATAGGGTTGTTTTAATCGGCAGACTGACGAGAGATCCGGAATTAAGATATA 35917 ||||| |||| | || |||| |||||| | || || | |||||||| | | |||| Sbjct 78236 GGATGTTGAACCGTGTCATTTTGATCGGCCGGCTTACCCGGGATCCGGAGCTGCGTTATA 78177 Query 35918 CTCCATCCGGTGTAGCTGTCACCAAGTTTACCCTGGCGGTAGACCGTCCGTATATGAACC 35977 | |||||||| || || || || ||||||| | || || ||| | || | || | | Sbjct 78176 CGCCATCCGGCGTTGCGGTAACTCAGTTTACTATCGCAGTGGACAGACCTTTTACGTCGC 78117 Query 35978 AGCAAACGCGTGAGCGAGAGA--CGGATTTCATTAATATCGTGACGTGGAGACAAACCGC 36035 | | ||| ||| ||||| |||||||||| |||| ||||||||||| || Sbjct 78116 A----AGGCG-GAGAAAGAGAAGCGGATTTCATACCGGTCGTAACGTGGAGACAGCTTGC 78062 Query 36036 GGAAGCCTGTGCCAATCACCTTCGCAAAGGCCGTTTGACGGCAGTAGAAGGAAGAATCCA 36095 ||| | ||||| || |||| |||||||| ||| |||| || |||||||| | || || Sbjct 78061 TGAAACTTGTGCGAACTACCTGCGCAAAGGGCGTCTGACTGCTGTAGAAGGGCGCATTCA 78002 Query 36096 GGTGCGTAATTATGAGAACAATGAGGGCCGCAGAATCTATGTAACCGAGGTTGTGGCTGA 36155 || ||||| |||||||| || || || | | || || || || ||| | ||||| Sbjct 78001 AGTACGTAACTATGAGAATAACGAAGGTAAACGTGTTTACGTCACTGAAGTTATTGCTGA 77942 Query 36156 TAATGTGCGCTTTCTTG 36172 |||||| || ||||||| Sbjct 77941 TAATGTTCG-TTTCTTG 77926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141474921117012