Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_028746.1
Length=44249
Score E
Sequences producing significant alignments: (Bits) Value
seq75 132 1e-26
>seq75
Length=349689
Score = 132 bits (146), Expect = 1e-26
Identities = 222/317 (70%), Gaps = 8/317 (3%)
Strand=Plus/Minus
Query 35858 GGATGCTGAATAGGGTTGTTTTAATCGGCAGACTGACGAGAGATCCGGAATTAAGATATA 35917
||||| |||| | || |||| |||||| | || || | |||||||| | | ||||
Sbjct 78236 GGATGTTGAACCGTGTCATTTTGATCGGCCGGCTTACCCGGGATCCGGAGCTGCGTTATA 78177
Query 35918 CTCCATCCGGTGTAGCTGTCACCAAGTTTACCCTGGCGGTAGACCGTCCGTATATGAACC 35977
| |||||||| || || || || ||||||| | || || ||| | || | || | |
Sbjct 78176 CGCCATCCGGCGTTGCGGTAACTCAGTTTACTATCGCAGTGGACAGACCTTTTACGTCGC 78117
Query 35978 AGCAAACGCGTGAGCGAGAGA--CGGATTTCATTAATATCGTGACGTGGAGACAAACCGC 36035
| | ||| ||| ||||| |||||||||| |||| ||||||||||| ||
Sbjct 78116 A----AGGCG-GAGAAAGAGAAGCGGATTTCATACCGGTCGTAACGTGGAGACAGCTTGC 78062
Query 36036 GGAAGCCTGTGCCAATCACCTTCGCAAAGGCCGTTTGACGGCAGTAGAAGGAAGAATCCA 36095
||| | ||||| || |||| |||||||| ||| |||| || |||||||| | || ||
Sbjct 78061 TGAAACTTGTGCGAACTACCTGCGCAAAGGGCGTCTGACTGCTGTAGAAGGGCGCATTCA 78002
Query 36096 GGTGCGTAATTATGAGAACAATGAGGGCCGCAGAATCTATGTAACCGAGGTTGTGGCTGA 36155
|| ||||| |||||||| || || || | | || || || || ||| | |||||
Sbjct 78001 AGTACGTAACTATGAGAATAACGAAGGTAAACGTGTTTACGTCACTGAAGTTATTGCTGA 77942
Query 36156 TAATGTGCGCTTTCTTG 36172
|||||| || |||||||
Sbjct 77941 TAATGTTCG-TTTCTTG 77926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141474921117012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |