Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_028854.1 Length=43724 Score E Sequences producing significant alignments: (Bits) Value seq56 138 3e-28 >seq56 Length=175490 Score = 138 bits (152), Expect = 3e-28 Identities = 158/207 (76%), Gaps = 9/207 (4%) Strand=Plus/Minus Query 21760 AGAGAAGGATCCTGA---CTGATTTGCTTGCTTGATCCAGCGATCCAATGCAGATGCACT 21816 ||| || || ||||| |||| ||||| |||||||||||||| | ||||||| || Sbjct 134607 AGAAAACGAGCCTGAGGTCTGA---GCTTGTTTGATCCAGCGATCTAGCGCAGATGGGCT 134551 Query 21817 CAGTTCATACTCATTTATAATGGCTGCTCTTGATTTTCCATTCTCGTGAAGTTGGACCAT 21876 || |||| ||| || | ||| |||||||||||||| || || || | | || |||| Sbjct 134550 AAGCTCATCCTCTTTCACAATAGCTGCTCTTGATTTCCCGTTTTCATATAACTGAACCA- 134492 Query 21877 TTGTCTCTTGAAATCATCTGTGAATGTACGTCTTTGTCTTGGCATAATAGATCCGTTCCC 21936 | ||||||| || || |||| ||||||||||||| | |||||||| |||||||| ||| Sbjct 134491 TGGTCTCTT-AATTCTGCTGTAAATGTACGTCTTTCTTTTGGCATAGTAGATCCGCTCCT 134433 Query 21937 TATAATAAT-ATGTTATTCTACTAGCC 21962 || ||||| || | ||||||||||| Sbjct 134432 AATTATAATGATTTCGTTCTACTAGCC 134406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139794924428712