Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_028906.1
Length=75933
Score E
Sequences producing significant alignments: (Bits) Value
seq126 98.7 5e-16
>seq126
Length=40741
Score = 98.7 bits (108), Expect = 5e-16
Identities = 421/661 (64%), Gaps = 11/661 (2%)
Strand=Plus/Plus
Query 66458 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGTAC 66517
||||| || |||||| || || | ||| | || || || |||| || || | |
Sbjct 13999 GTGGAAATCGTTCCCAGTGGTTCCTTGGCTTTAGATATTGCACTCGGCACAGGCGGATTC 14058
Query 66518 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66577
|| | ||||| | | || ||||||| || ||||| || || || | || | |
Sbjct 14059 CCTCGCGGCCGTATTATTGAGGTCTACGGACCGGAATCCTCCGGTAAAACTACGGTAGCT 14118
Query 66578 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66637
|| || || | || | | || ||| || || | || || | |||||||| |||
Sbjct 14119 CTTCATGCTATTGCAGAAGTACAAAAGATTGGCGGACAAGCTGCTTTTATCGACGCGGAG 14178
Query 66638 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66697
|| | || ||||| || ||||| ||||| || | |||| | | || ||
Sbjct 14179 CATGCGCTTGACCCGTCTTATGCCAATAAACTCGGCGTAAATATCGATGAATTGCTGCTG 14238
Query 66698 GTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66757
||||| ||||| ||||||||||| ||||||||| || | | || ||||
Sbjct 14239 TCCCAGCCTGATACAGGCGAGCAGGCATTGGAGATCGCCGAAGCCTTGGTGCGCAGTGGC 14298
Query 66758 GAGCTGTCCATCGTC--GTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66815
| |||| || | || |||||||||| ||||| ||||| || || || | |
Sbjct 14299 G--CTGTAGATATTATTGTTATTGACTCCGTTGCGGCACTGGTACCTAAAGCGGAAATTG 14356
Query 66816 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGC 66875
|||| || || || ||| ||| || || || || ||| | || ||||| ||||| |||
Sbjct 14357 AAGGTGAAATGGGAGACTCTCATGTGGGTCTTCAAGCGAGACTGATGTCGCAGGCACTGC 14416
Query 66876 GCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGC 66935
| || | | ||| | ||| || | || ||| | | ||| | |||||| |||
Sbjct 14417 GTAAATTGTCCGGCGCAATCAGCAAATCGAAGACGATTGCTATCTTCATTAACCAGCTGC 14476
Query 66936 GCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGC 66993
| |||||| | || | || | || |||| || || || |||||||| ||
Sbjct 14477 GTGAGAAGGTTGGGGTTATGTTTGGTAA--CCCG---GAAACTACGCCGGGCGGACGCGC 14531
Query 66994 TTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGG 67053
||||| |||||| | | || ||| |||| || || || ||| ||| || ||
Sbjct 14532 TTTGAAATTCTACTCGACCGTACGTCTGGACGTACGCCGTGTCGAAACCATTAAAATGGG 14591
Query 67054 CGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 67113
| || || || |||||||||||||| || ||||| ||||| || |||| || ||
Sbjct 14592 TAACGATATGGTGGGTAACCGCACCCGGGTTAAAGTCGTGAAGAATAAAGTGGCTCCTCC 14651
Query 67114 G 67114
|
Sbjct 14652 G 14652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242860308662244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |