Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq126 98.7 5e-16 >seq126 Length=40741 Score = 98.7 bits (108), Expect = 5e-16 Identities = 421/661 (64%), Gaps = 11/661 (2%) Strand=Plus/Plus Query 66458 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGTAC 66517 ||||| || |||||| || || | ||| | || || || |||| || || | | Sbjct 13999 GTGGAAATCGTTCCCAGTGGTTCCTTGGCTTTAGATATTGCACTCGGCACAGGCGGATTC 14058 Query 66518 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66577 || | ||||| | | || ||||||| || ||||| || || || | || | | Sbjct 14059 CCTCGCGGCCGTATTATTGAGGTCTACGGACCGGAATCCTCCGGTAAAACTACGGTAGCT 14118 Query 66578 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66637 || || || | || | | || ||| || || | || || | |||||||| ||| Sbjct 14119 CTTCATGCTATTGCAGAAGTACAAAAGATTGGCGGACAAGCTGCTTTTATCGACGCGGAG 14178 Query 66638 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66697 || | || ||||| || ||||| ||||| || | |||| | | || || Sbjct 14179 CATGCGCTTGACCCGTCTTATGCCAATAAACTCGGCGTAAATATCGATGAATTGCTGCTG 14238 Query 66698 GTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66757 ||||| ||||| ||||||||||| ||||||||| || | | || |||| Sbjct 14239 TCCCAGCCTGATACAGGCGAGCAGGCATTGGAGATCGCCGAAGCCTTGGTGCGCAGTGGC 14298 Query 66758 GAGCTGTCCATCGTC--GTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCG 66815 | |||| || | || |||||||||| ||||| ||||| || || || | | Sbjct 14299 G--CTGTAGATATTATTGTTATTGACTCCGTTGCGGCACTGGTACCTAAAGCGGAAATTG 14356 Query 66816 AAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGC 66875 |||| || || || ||| ||| || || || || ||| | || ||||| ||||| ||| Sbjct 14357 AAGGTGAAATGGGAGACTCTCATGTGGGTCTTCAAGCGAGACTGATGTCGCAGGCACTGC 14416 Query 66876 GCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGC 66935 | || | | ||| | ||| || | || ||| | | ||| | |||||| ||| Sbjct 14417 GTAAATTGTCCGGCGCAATCAGCAAATCGAAGACGATTGCTATCTTCATTAACCAGCTGC 14476 Query 66936 GCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGC 66993 | |||||| | || | || | || |||| || || || |||||||| || Sbjct 14477 GTGAGAAGGTTGGGGTTATGTTTGGTAA--CCCG---GAAACTACGCCGGGCGGACGCGC 14531 Query 66994 TTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGG 67053 ||||| |||||| | | || ||| |||| || || || ||| ||| || || Sbjct 14532 TTTGAAATTCTACTCGACCGTACGTCTGGACGTACGCCGTGTCGAAACCATTAAAATGGG 14591 Query 67054 CGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 67113 | || || || |||||||||||||| || ||||| ||||| || |||| || || Sbjct 14592 TAACGATATGGTGGGTAACCGCACCCGGGTTAAAGTCGTGAAGAATAAAGTGGCTCCTCC 14651 Query 67114 G 67114 | Sbjct 14652 G 14652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242860308662244