Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_028986.1 Length=153401 Score E Sequences producing significant alignments: (Bits) Value seq124 84.2 2e-11 seq56 82.4 7e-11 >seq124 Length=20559 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 90640 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 90699 |||| ||||| |||| |||| ||||| | ||||||||||||| | |||||| ||||||| Sbjct 11064 CGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCGAA 11005 Query 90700 TCCTGTCACCCCGACTCAG 90718 || ||||| ||||| |||| Sbjct 11004 TCGTGTCATCCCGATTCAG 10986 >seq56 Length=175490 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 90640 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 90699 |||| ||||| |||| |||| ||||| | ||||||||||||| | |||||| ||||||| Sbjct 122424 CGGGATGTAGCTCAGCTTGGTAGAGCACCTGGTTTGGGACCAGGGGGTCGCATGTTCGAA 122483 Query 90700 TCCTGTCACCCCGAC 90714 || ||||| |||||| Sbjct 122484 TCGTGTCATCCCGAC 122498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 490754181682960