Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12-
23] 166 sequences; 31,780,530 total letters
Query= NC_028999.1
Length=309208
Score E
Sequences producing significant alignments: (Bits) Value
seq150 93.3 8e-14
seq75 93.3 8e-14
seq45 93.3 8e-14
>seq150
Length=10434
Score = 93.3 bits (102), Expect = 8e-14
Identities = 71/80 (89%), Gaps = 3/80 (4%)
Strand=Plus/Minus
Query 294860 ATGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918
||||||||||| ||| ||| | |||||| | ||||||||||||||||||||||||||||
Sbjct 1433 ATGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTA 1376
Query 294919 CCAGCTGAGCTATAACGGCA 294938
|||| ||||||| |||||||
Sbjct 1375 CCAGTTGAGCTACAACGGCA 1356
>seq75
Length=349689
Score = 93.3 bits (102), Expect = 8e-14
Identities = 71/80 (89%), Gaps = 3/80 (4%)
Strand=Plus/Minus
Query 294860 ATGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918
||||||||||| ||| ||| | |||||| | ||||||||||||||||||||||||||||
Sbjct 253565 ATGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTA 253508
Query 294919 CCAGCTGAGCTATAACGGCA 294938
|||| ||||||| |||||||
Sbjct 253507 CCAGTTGAGCTACAACGGCA 253488
Score = 89.7 bits (98), Expect = 1e-12
Identities = 69/78 (88%), Gaps = 3/78 (4%)
Strand=Plus/Minus
Query 294861 TGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTAC 294919
|||||||||| ||| ||| | |||||| | |||||||||||||||||||||||||||||
Sbjct 253227 TGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTAC 253170
Query 294920 CAGCTGAGCTATAACGGC 294937
||| ||||||| ||||||
Sbjct 253169 CAGTTGAGCTACAACGGC 253152
>seq45
Length=67623
Score = 93.3 bits (102), Expect = 8e-14
Identities = 71/80 (89%), Gaps = 3/80 (4%)
Strand=Plus/Plus
Query 294860 ATGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918
||||||||||| ||| ||| | |||||| | ||||||||||||||||||||||||||||
Sbjct 2231 ATGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTA 2288
Query 294919 CCAGCTGAGCTATAACGGCA 294938
|||| ||||||| |||||||
Sbjct 2289 CCAGTTGAGCTACAACGGCA 2308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989332295809398
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |