Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq150 93.3 8e-14 seq75 93.3 8e-14 seq45 93.3 8e-14 >seq150 Length=10434 Score = 93.3 bits (102), Expect = 8e-14 Identities = 71/80 (89%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 294860 ATGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918 ||||||||||| ||| ||| | |||||| | |||||||||||||||||||||||||||| Sbjct 1433 ATGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTA 1376 Query 294919 CCAGCTGAGCTATAACGGCA 294938 |||| ||||||| ||||||| Sbjct 1375 CCAGTTGAGCTACAACGGCA 1356 >seq75 Length=349689 Score = 93.3 bits (102), Expect = 8e-14 Identities = 71/80 (89%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 294860 ATGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918 ||||||||||| ||| ||| | |||||| | |||||||||||||||||||||||||||| Sbjct 253565 ATGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTA 253508 Query 294919 CCAGCTGAGCTATAACGGCA 294938 |||| ||||||| ||||||| Sbjct 253507 CCAGTTGAGCTACAACGGCA 253488 Score = 89.7 bits (98), Expect = 1e-12 Identities = 69/78 (88%), Gaps = 3/78 (4%) Strand=Plus/Minus Query 294861 TGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTAC 294919 |||||||||| ||| ||| | |||||| | ||||||||||||||||||||||||||||| Sbjct 253227 TGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTAC 253170 Query 294920 CAGCTGAGCTATAACGGC 294937 ||| ||||||| |||||| Sbjct 253169 CAGTTGAGCTACAACGGC 253152 >seq45 Length=67623 Score = 93.3 bits (102), Expect = 8e-14 Identities = 71/80 (89%), Gaps = 3/80 (4%) Strand=Plus/Plus Query 294860 ATGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918 ||||||||||| ||| ||| | |||||| | |||||||||||||||||||||||||||| Sbjct 2231 ATGGTGCCGTC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTTGCTCTA 2288 Query 294919 CCAGCTGAGCTATAACGGCA 294938 |||| ||||||| ||||||| Sbjct 2289 CCAGTTGAGCTACAACGGCA 2308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989332295809398