Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20violaceum_20[genbank_20GCA_5F900015425.1_202016-12- 23] 166 sequences; 31,780,530 total letters Query= NC_029022.1 Length=46895 Score E Sequences producing significant alignments: (Bits) Value seq63 86.0 2e-12 >seq63 Length=35995 Score = 86.0 bits (94), Expect = 2e-12 Identities = 167/246 (68%), Gaps = 7/246 (3%) Strand=Plus/Plus Query 25429 AGACGTAACTGGCAAGTTGGAAGTATAGAAAAACATGGAGATAGCTATGTAGTAGAAATA 25488 || || || ||||| || ||| | ||||||| || || ||| |||||| || || ||| Sbjct 24031 AGGCGGAATTGGCAGGTCGGACGGGTAGAAAAGCACGGCGATGCCTATGTGGTGGAGATA 24090 Query 25489 TTTAATAATACCGAATATGCTTCTTATGTAGAATATGGGCAT-----AGGACAAGAGACC 25543 || || ||||| ||||| || |||| || || || || || ||| ||| | || Sbjct 24091 TTCAACAATACGGAATACGCCTCTTTCGTGGAGTACGGTCACCGTGCAGGGCAAAACTCC 24150 Query 25544 ATAAAGGATGGGTTGAAGGTAGATTTATGGCTGCTATATCAATGCAAGAGATAGAAAGAC 25603 ||| ||||| || || | || ||| | ||||| ||||| || || || | | Sbjct 24151 CGGAAG--TGGGTGGAGGGCCGGTTCATGATGACCATATCCATGCAGGAAATTGAGAAGC 24208 Query 25604 AGTTACCAAAGTTTTTAGAGAAAAAGCAAGTAGAATTATTAGAGCAAATACTGAATGGTA 25663 |||| || |||||| | || ||||||||||| | | || ||| | |||| || | Sbjct 24209 AGTTTCCCCGGTTTTTGGCTAAGAAGCAAGTAGAGCTGCTGGAACAACTTATGAACGGAA 24268 Query 25664 GGTGAT 25669 |||||| Sbjct 24269 GGTGAT 24274 Score = 82.4 bits (90), Expect = 2e-11 Identities = 176/263 (67%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 28127 GGTTGGAAAGGGACAGGCACACTTACTGTTTATTATGCAACTTCTCTATTTAGAGAATTA 28186 || ||||| || || |||| | ||| ||||||||||||| | | ||| | || | Sbjct 26406 GGCTGGAAGGGTACGGGCAGTATGACTATTTATTATGCAACGCCGATTTTTCGCCAAATG 26465 Query 28187 ATGCTTAAATACATGAAAGATGGTATTGATACTTATTTTGACCTTGCTGTAACTAATGAG 28246 |||||| | || || || || | ||||| |||||||| || || | || ||| Sbjct 26466 ATGCTTGATTATATTAAGACCGGCAAGGATACCTATTTTGATGTTCAGGTGATCAACGAG 26525 Query 28247 GACCCAACAAGTAACATTGGTAAGCAAACAATTGTTTTAAAAAATTGTAATTTAGATGAA 28306 || || | |||| ||||| |||||||| | || || ||||| || | || Sbjct 26526 GATCCGAGCAGTACGATTGGCAAGCAAACGGTGGTGTTGAAAAACGTAAACCTGGACAGC 26585 Query 28307 GTAAGTATGGCTATGTTTGATGTTGATAGTGAGGTATTAGAGGAAGATATGAGCTTTACA 28366 ||| |||||||| ||||||||||| || | | || || ||||| |||||| Sbjct 26586 GTAGTTATGGCTAAATTTGATGTTGAAGCCGATTTCCTGGACGAGGATATTGATTTTACA 26645 Query 28367 TTTGAAGATGTTGACATGTTAGA 28389 || || || || |||||| |||| Sbjct 26646 TTCGATGACGTGGACATGCTAGA 26668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149942104426044